| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2057 |
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| Symbol | |
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| ID | 5539537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2638658 |
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| End bp | 2639353 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894193 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001432162 |
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| Protein GI | 156742033 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.575902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.725106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCCGTTA TCGGTGCCAA TCAGCGTCTG ATACGCTTGA TGCCATCCAT CCTCGCCGCC
GACTTTCTGC GGCTGGGTGA GCAGGCGCGC GAAGTTGCCG AAGCAGGCGC CGATGGGCTG
CATATTGACG TGATGGACGG CCTGTTCGTG CCGAACATCA GCATCGGCAT ACCGGTCGTT
GCTGCACTGC GCCGTGCAGT CGATCTGCCG CTCGATTGCC ATCTGATGAT CGTCGATCCC
GAACGCTACC TTGAGGCATT CGTCACGGCC GGCGCAACCC ACATTACTGT TCACGTCGAA
GCCTGCCGTC ACCTGCACCG CACGATTCAG CAGATCCACG ACCTTGGGGT TACGGCGGGG
GTGGCGCTCA ATCCGGCCAC GTCGCTAACC GCTATCGAAG ACATTCTGCC CGACCTCGAT
CTGGTGCTGA TGATGAGCGT CGATCCGGGG TTCAGTGGGC AAACCTACAT TCCACGTAGC
ACGGCGAAGA TCGCCCGCTT ACGACGCATA CTCGACGAGT GCGGGTTGCA ACATATCGAG
TTGCAGGTCG ATGGCGGCAT CAGCGCCGCA AATGTCGCCG ATGTGGTCGG CGCTGGCGCT
ACCAGTATCG TCGCGGGTAC GGGGGTGTTT AACTCGCTCC CCATCGCCGA AACGATACAG
GCGCTCCGTT GGGCGATTCA ACCTCATAAC TCCTGA
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| Protein sequence | MPVIGANQRL IRLMPSILAA DFLRLGEQAR EVAEAGADGL HIDVMDGLFV PNISIGIPVV
AALRRAVDLP LDCHLMIVDP ERYLEAFVTA GATHITVHVE ACRHLHRTIQ QIHDLGVTAG
VALNPATSLT AIEDILPDLD LVLMMSVDPG FSGQTYIPRS TAKIARLRRI LDECGLQHIE
LQVDGGISAA NVADVVGAGA TSIVAGTGVF NSLPIAETIQ ALRWAIQPHN S
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