| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2055 |
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| Symbol | |
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| ID | 5539535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2635606 |
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| End bp | 2637795 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640894191 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001432160 |
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| Protein GI | 156742031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.265911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCG CTACCATCAC ACAATGGATC ATGCGGCAAG TAACTTTTGT ACGTCCGATG
ATTCGCCCAA TCCTCACGAC GCTTGCACTG CTCACCGCGC TCCTGTTTGT CGCATCAACC
ACACCGCATT CTATTGCATA CCCTGCCGAA GGCATCGGTT TCAGCGTCGA TGGTTTCTGG
CAACCGGAAT TCAACGCTGA GCGCTCATAT CGCTGGACGA GAGGCATAAC GCGCGTGCGC
ATTCCAGGAT TTGAAGATGC ATCGCTCCTC CTGGTTTCGC TCCAACTCTC CGCGCCGCAA
CAATCAGGTG CAACGCATAC GCCTGCAACT GTGGCAACGG ACAAGAGTGC GCCAATGCGC
TTCAGTATTG CTCCCGAATG GCGCACCTAT CATTTGCTGA TCGATGCGCA ATCCCCAGAT
TGGCGCATTC CTGCGTTGAT GATCACAAAC CCTACGTGGC GTCCACGCGG AGATGAACGT
GATCTAGGCA TCGTGTTCGG TCATATGAAT GCGCAGCGCC TTCTTCCATC TTATACCGCT
GCTATTGTTG AGCGCTGGAT GTTTCTTGCG TCGCTGGTCG CTCTGACAAC GGTTGCCACG
CGATGCGCAC CGCGATGGAA TCTTCTGCCA GGCATTCTGA CGGCGCTGCT GGTGATGGGT
TCGCTATGGG CGCCGGTTCG TCTAAGTCAG GCATTGCCGA CGAACTGGCA GATCGTCATC
GGCATAGCAA TCGTTACGTT GTATATCGAA GGCTTCCGTC GCTACCGACA ACGTATGCCA
AACAGCATTT TTCCACTCAT CGGGGTTGCT GGCGTCACCC TCGGCACCGG GATTGTTTGG
AGGGGATGGG CAATTGTCGG AGCAGCAGTG ATGATATGTA GCGCCCTCCT ATCCGTGTAT
ACGCGCACAT TGCGCTCCGA TTCAGGTAAG CGTCAGTCTG CGGATCGGTC ATCGCTCCGC
CGCCTGTGGC TGAGTGGTCT GGCGATTGCA GTTTTCGCCG GCGGCGTGCT TATTCCGAAC
AATAACGACG TATATCACGG TGATGAGAAC TTTTGGGCGA CCACCGGATT GCGCGCTTTT
CGTCTCGCAT TCATCGAACG TGATATATAT CACCCTTTCT GGACTGAGCC TTTAAGATCT
TCTCTGTGGG CATATTCGCC GATATTCGCA CTGCCACATC CGCAGATCGG CAAATACTTG
TTTGGAGCAG GGTTATATCT TGCAGGGCAC ACTGACCCGC TAATACGAGG ATATGACTTC
TCTCGAAGTC TGGCTTGGAA CAAAGCGCAC AATCGCGTAA TATCTCCTGA TGTTGCCAGC
GCTGCCCGTT TCCTTGTCAC ATTGACAGCA ATTGCGAGCA CTGTGCTCGT CTACTGGATC
GGGGTTCGTC TCGGCGGCGT CGCCGTCGGC GTGCTGGCTG CTGCGCTGAT GAACGCTCCG
GAGTCGATGC GTTATCACGG AAAGATCATC ATGCTTGATG TTCCCGCATT GATATTCGGG
TTGCTTGCTC TGGTGATATG CGCTGAGATG CTGCGTAGTT GGCGCCAGGG AAATCGGCGC
GCCATCTTCT TGACCATTGC GTGCGGCGTA GTCTGCGGTC TGGGATTAGG AACAAAACTC
AATGCCGCTC TTGTCGTCCT AACCTGCCTC TTTGTGTCCG TCATCTTCGC CGTCTGGCGC
AGTCGCCGCT TCGCAGTGAC GCCGTTTGTG CCAAAGCGCG CCGTCGTCGC CATTGCTCTG
TGCGCCTGGA CGGTATTCTT TCTCTCCAAT CCTGCGCTCT ACCGGCAACC GGTCGAAGGC
ATCCGGCGGA TGCTGGACTT TGGTACTGAT ATAGGGTGCA ATCCAGAATT GTCCTGGTGT
CATCCCTTAC CAACACCAAC TGATCGGATG AGGGCTATCT GGTTTTTTCT AAGTGATGAA
GGCGAAGTTA ATGCTGGCGG TCTGCCTGGC AGTCACCTGT TATTGATCAT TGGCGCCGCA
GCATTGGCGG TCAGACTGTC GCGCTGGACG GGAAGCAACG ATGTTGAAAT TGTCTTAATC
AGCGCATGGA TAATTATCAC CCTCGCAGGA TTGATGCTCT GGCTACCCAT TGGCATTTTT
CGCTATGTTA TGCCGCTTGT TCCGATTTCG ATGCTTCTTC AGTCGTATGG TATAATTGGA
ATTCTGCGAA GCATCACACG CACGGATTGA
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| Protein sequence | MQTATITQWI MRQVTFVRPM IRPILTTLAL LTALLFVAST TPHSIAYPAE GIGFSVDGFW
QPEFNAERSY RWTRGITRVR IPGFEDASLL LVSLQLSAPQ QSGATHTPAT VATDKSAPMR
FSIAPEWRTY HLLIDAQSPD WRIPALMITN PTWRPRGDER DLGIVFGHMN AQRLLPSYTA
AIVERWMFLA SLVALTTVAT RCAPRWNLLP GILTALLVMG SLWAPVRLSQ ALPTNWQIVI
GIAIVTLYIE GFRRYRQRMP NSIFPLIGVA GVTLGTGIVW RGWAIVGAAV MICSALLSVY
TRTLRSDSGK RQSADRSSLR RLWLSGLAIA VFAGGVLIPN NNDVYHGDEN FWATTGLRAF
RLAFIERDIY HPFWTEPLRS SLWAYSPIFA LPHPQIGKYL FGAGLYLAGH TDPLIRGYDF
SRSLAWNKAH NRVISPDVAS AARFLVTLTA IASTVLVYWI GVRLGGVAVG VLAAALMNAP
ESMRYHGKII MLDVPALIFG LLALVICAEM LRSWRQGNRR AIFLTIACGV VCGLGLGTKL
NAALVVLTCL FVSVIFAVWR SRRFAVTPFV PKRAVVAIAL CAWTVFFLSN PALYRQPVEG
IRRMLDFGTD IGCNPELSWC HPLPTPTDRM RAIWFFLSDE GEVNAGGLPG SHLLLIIGAA
ALAVRLSRWT GSNDVEIVLI SAWIIITLAG LMLWLPIGIF RYVMPLVPIS MLLQSYGIIG
ILRSITRTD
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