| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2053 |
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| Symbol | |
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| ID | 5539533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2633454 |
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| End bp | 2634896 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894189 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001432158 |
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| Protein GI | 156742029 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.449201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAAGG AAGGAATAAC TCCCCGCGCG CAGGATTATT CGCAGTGGTA TCTCGATATT
GTGCAACAGG CGGACCTCGC CGACTATGCG GAGGTCGTCA AAGGGTGCAT TGTCTTCAAA
CCGACCGGCT ATGCGCTGTG GGAGGCGATC CAGCGCGGGT TGGACGACCG GATCAAGGCG
ACCGGTCATG TCAATGCCTA CTTTCCGCTG CTCATTCCAA AAAGTTTCCT GATGAAAGAA
GCCGAGCACG TCGAAGGCTT TGCGCCCGAA GTGGCGGAAG TAACCCGTGC CGGTGGCGAA
GACCTTGCCG AACCCTATGT CATCCGACCG ACCTCGGAAA CGATCATCGG CTACTTCTAT
TCCAAATGGG TGCGAAGTTA CCGCGATCTG CCGCTGCTGA TCAATCAGTG GGCAAACGTG
ATGCGCTGGG AGATGCGCAC CCGCCCCTTC CTGCGCACCA CCGAGTTCCT CTGGCAGGAG
GGGCACACGG TGCATGCCAC CGAGGAAGAT GCCGAACGCG AAACGCTCTT GATCCTTCAC
GAGGTGTATG CCGACTTCGT TGAGAAGGAT ATGGCGATTC CGGTAATCAG GGGGCTGAAA
TCGGAGAAAG AAAAGTTCCC CGGCGCGCTG CGCTCCTACT GTATCGAAGC CATGATGCAG
GACGGACGGG CGCTTCAGGC GGGAACATCG CACAACCTGG GGCAGAACTT TGCCCGCGCC
TTCGATATTA CCTATACCGA TCAGCACAAT ACCATTCAGT ACGCCTGGAC GACCAGCTGG
GGCGTCAGCA CACGCCTGAT CGGCGCCCTG ATTATGACCC ATTCCGATGA TGAAGGCCTC
GTCATCCCAC CGCGCCTGGC GCCGACACAG GTCGTCGTCG TGCCGATTTA CCGGAACGAT
GCCGAGCGCA GTGTGGTCAT GGAAGCGGTG CAGCGTATGA CCGCCGAATG GAAGGGACTC
CTGCGCTTCA AGGTCGATGA CCGCGATAAT CTGACGCCAG GATTCAAGTT CAATGAGTGG
GAATTGAAAG GTGTTCCTAT CCGCGTCGAG ATCGGTCCGA AAGACATCGA AAAAGGAAGC
GTCGCCATTG CCCGGCGCGA CCAACCAGGG CGCGAAGGTA AATCGTTCGT TCCTCAGGAA
GGACTGACCG CCCGCCTCGC TGCGCTGCTT GAGGAAATTC AGCAGGCGCT CTACCGGCGC
GCACTGGCAT TCCGTGAAAC GCATACCGCC GATGTCACGA CCTATGAGGA ACTGAAACAA
CAGGTCGAAC GCGGTTTTGC GCGCTGCTAC TGGGCGGGAA CTATGGAAGA CGAAAAGCGA
ATCCAGGAAG AGACGCGCGC TACCATTCGC TGCATCCCGC TCGACCAACC GCAACAGGCG
GGGAGGTGCA TCTACACCGG CAAAGAGACA ACCCAGCAGG TCATCTTCGC GCGGGCATAT
TGA
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| Protein sequence | MPKEGITPRA QDYSQWYLDI VQQADLADYA EVVKGCIVFK PTGYALWEAI QRGLDDRIKA
TGHVNAYFPL LIPKSFLMKE AEHVEGFAPE VAEVTRAGGE DLAEPYVIRP TSETIIGYFY
SKWVRSYRDL PLLINQWANV MRWEMRTRPF LRTTEFLWQE GHTVHATEED AERETLLILH
EVYADFVEKD MAIPVIRGLK SEKEKFPGAL RSYCIEAMMQ DGRALQAGTS HNLGQNFARA
FDITYTDQHN TIQYAWTTSW GVSTRLIGAL IMTHSDDEGL VIPPRLAPTQ VVVVPIYRND
AERSVVMEAV QRMTAEWKGL LRFKVDDRDN LTPGFKFNEW ELKGVPIRVE IGPKDIEKGS
VAIARRDQPG REGKSFVPQE GLTARLAALL EEIQQALYRR ALAFRETHTA DVTTYEELKQ
QVERGFARCY WAGTMEDEKR IQEETRATIR CIPLDQPQQA GRCIYTGKET TQQVIFARAY
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