| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2052 |
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| Symbol | |
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| ID | 5539532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2630784 |
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| End bp | 2631401 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894188 |
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| Product | pyrrolidone-carboxylate peptidase |
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| Protein accession | YP_001432157 |
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| Protein GI | 156742028 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.976039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACCT TGCTCGTCAC CGGTTTCGAG CCGTTCGGCG GCGCTTCGGT CAATCCTTCG
GCGGAAGTTG TGCGTCGTTT CACGAACAAT GGTAAACCGC CAGATGCGGT CACTGCCATT
CTTCCGGTCG ATGCCGTTCA GGCGCCTCGT ATGATAACCG ATCTGCTGCT CGATCACCAA
CCCGATCTCT GCCTGATGCT CGGACAGGCG GACGGGTATG CTGCGCTCAC GGTTGAGCGT
GTGGCGATCA ACCTGTGCGA TTTTCGCATC CCGGATAATG CCGGCGCTCA ACGGGTCGAT
GAACCGATTG TAGAGGATGG ACCGGCAGCG TATTTCTCCA CCGCGCCGGT GCGCGATGTA
GTGCGGGCGA TTCGCGCTGC GGGCGTGCCT GTTGATCTCT CTCTGTCGGC AGGAGCGTAT
CTATGCAATA TGGTGTACTA CACTGCACTG CACGTCTGCG CCACGCATTG TTTGCCAACG
CGATGTCTGT TCATTCACTT GCCGTCGCTG CCATCGCAGG CAAGCGCTGA TCGCGCGCCT
CGTCCGACAA TGGCGCTCGA AACAATGTAT GCAGGGGTGT GCGCTGCATT GCGAGCGGGA
TTGGGGGGTG AGAACTGA
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| Protein sequence | MSTLLVTGFE PFGGASVNPS AEVVRRFTNN GKPPDAVTAI LPVDAVQAPR MITDLLLDHQ
PDLCLMLGQA DGYAALTVER VAINLCDFRI PDNAGAQRVD EPIVEDGPAA YFSTAPVRDV
VRAIRAAGVP VDLSLSAGAY LCNMVYYTAL HVCATHCLPT RCLFIHLPSL PSQASADRAP
RPTMALETMY AGVCAALRAG LGGEN
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