Gene Rcas_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2049 
Symbol 
ID5539527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2627211 
End bp2627627 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID640894183 
Productsingle-strand binding protein 
Protein accessionYP_001432154 
Protein GI156742025 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAGG TCAGAGGGAC TGTCAACACC GTCGAACTCA TCGGTTGGCT CGGCGACGTA 
CCCGAACAGC GCATCTTCCC ATCGGGAGCG CGCGTATGCC GCTTCAACGT GGCTACCAAG
CACTTTGGGG CGCGGAGCGA GAACGGCGAG CGGGAGATCG AAACCGATTG GACGCTCATC
GAGGCGTGGG ACAAACTCGG CGATCAGTGC ATCAACTCCC TGCACAAAGG GAGCCGGGTG
CGGATCGTTG GAAGCCTGCG CACACAGAGC TGGGAAGACA AAGAAACCGG TCTACGCCGC
TATAAGGCAT TCGTGCGCGC CGAGGAAGTG CTGTTCCTGG ATAGCAAGGC GAACGCAAAC
GAAAACGAAC AGGATGCGAT CGAGACCTCG GATGAGGCAG AGGAGGTTCC ATTCTAG
 
Protein sequence
MRQVRGTVNT VELIGWLGDV PEQRIFPSGA RVCRFNVATK HFGARSENGE REIETDWTLI 
EAWDKLGDQC INSLHKGSRV RIVGSLRTQS WEDKETGLRR YKAFVRAEEV LFLDSKANAN
ENEQDAIETS DEAEEVPF