Gene Rcas_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2041 
Symbol 
ID5539519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2615887 
End bp2616255 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID640894176 
Producthypothetical protein 
Protein accessionYP_001432147 
Protein GI156742018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000112803 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCG CAGACAAGAC ACTCACCTGT CGGGATTGTG GCGTGGATTT TGTGTTCACC 
TCCGGTGAGC AGGAGTTTTA CGCGCAGAAG GGATTTACGA ACGAGCCAAC GCGCTGCCCG
TCGTGTCGGC AGCAGCGCAA AGGGTCGGGC GGCGGGCGTG GCTACGGCGA GCGCAATGGA
TACGGCAGGA ACGACGGTTA TAGCAGCGGG CGCGGCGGTT ATAGCGGCGA ACGTCAGATG
CATACCACCA CCTGCGCCGC GTGTGGTCGT GAAGCGCAGG TGCCGTTCGT GCCACGCGGC
GATAAGCCGG TCTACTGTTC GGACTGTTTC CAGGATCAGC GCCGCAGCAG CGGGCGCGGT
CGCTGGTAG
 
Protein sequence
MSFADKTLTC RDCGVDFVFT SGEQEFYAQK GFTNEPTRCP SCRQQRKGSG GGRGYGERNG 
YGRNDGYSSG RGGYSGERQM HTTTCAACGR EAQVPFVPRG DKPVYCSDCF QDQRRSSGRG
RW