Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2037 |
Symbol | |
ID | 5539515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2610863 |
End bp | 2611804 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894172 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001432143 |
Protein GI | 156742014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTGC CGAACTGCGA CGAAATGATA GACCTTATTC CTGCTTTCGT GCTGGGCGCG CTTGATCCAG ACGAAGCCGC ACGTGTGGCA ACCCACATCG CGGCATGCCC GCGCTGTCGC GCCGAAGCGG AGTCGTTCCG CGACACGATG GGGCTACTGC CCTATGCGGC AGGCGCCATC GATCCGCCGC CACACGTCAA ACGTCAGTTG TTTGCGCGCA TTGCCGCAGC CAGCGAAAAC TCTGTCACTC AACCTGTTCA GCAACCGCAG CGACGAACCG CGCGCGCGCC TCTGCCATGG CGCTGGTTCG CGCCGGCGCT GGCATTGGTG CTGGCGCTGA TCATCGGATT GGGCGCTGTA ACGTTCGAGG CGCGCGGACG CGCCGATCAA CTGGCAGCGG ACCTCGCAGC CAACCGTCAG ATGCTGCGTT CGATGGAGGC GCAGATTGCC GAGGCGCGTC AGACCGCGCA GACCGTCCAG GCGCAACTGG TTGCCAGTCA GCGTGCACTC AACGAAACGC GCGTGCAACT CGCCGCCAGT CAGCAAGAGT TGCAGAAAAT CCAGGCGTCA ATTGGAAAGG ACGAGCAACT TGTGGCGTTC ATTGCTGCGC CACAGACCGT CTCTCAATTG CTGGGAACCA CCGATCGCGC GCCGGAAGAG GCAAGTGCGC GGATGTTTAT GCAGCCGGGA CATAACCGGC TCGCGTTGCT CATCTACGGG CTGAAGTCCG CCGAACCCGG CAAGGTGTAT CGGTTGTGGC TGGCGAAGGG GAGTCAGGCG ATTGCCATTG GCACGGTGAC AGTCGGACCG GATGGGGTCG CTGAGTTCGT CGTGGATGCC CCAGAACCGA TGGACGCTTA TGATCAGGTG ATGATTACGC TGGACGAGAT AGATACGATT GCGCAGCCGA GCGAAGAAGT GATCTTCGAG GCGAATCTGT AA
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Protein sequence | MTLPNCDEMI DLIPAFVLGA LDPDEAARVA THIAACPRCR AEAESFRDTM GLLPYAAGAI DPPPHVKRQL FARIAAASEN SVTQPVQQPQ RRTARAPLPW RWFAPALALV LALIIGLGAV TFEARGRADQ LAADLAANRQ MLRSMEAQIA EARQTAQTVQ AQLVASQRAL NETRVQLAAS QQELQKIQAS IGKDEQLVAF IAAPQTVSQL LGTTDRAPEE ASARMFMQPG HNRLALLIYG LKSAEPGKVY RLWLAKGSQA IAIGTVTVGP DGVAEFVVDA PEPMDAYDQV MITLDEIDTI AQPSEEVIFE ANL
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