Gene Rcas_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2036 
Symbol 
ID5539514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2610130 
End bp2610804 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content48% 
IMG OID640894171 
Producthypothetical protein 
Protein accessionYP_001432142 
Protein GI156742013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAT GCGGTAGAAT GACAGACGCT CCAGTTGTCC ACATTGGGAA GGTTATTCGT 
CATGCTGTTG CATTCAATGT ACAGCACTGG CAGGGAACAA CGTTCAAAGT GGATCATTTG
CTCGATGCAG TAGCCGAATT ATTTAAGGTA CTGCGGGAGC GCCGGGTCAA TTACGCTCTG
GTTGGCGGCA TTGCGCTCTT GACGTATGTT CAGGGTCGAA ATACTGAGGA TATTGACCTG
ATCCTGAGTG TTCGTTCATT GAAGAAACTT CCTGAGCTTG TCGTTACTCA CAAGGATGTC
TATTTTGCTC GAGGAAATTA TAAAGGTCTC CAGGTTGATT TTCTCTTAAC GACGAATCGG
TTGTTTTCCC ACGTCAAGAA ACATCACGTA GTCACGCAGG ATTTCTTTGA GCAATCTGTT
CCTTCTGCTA CAGTCCGTGG ACTGATACTG CTCAGGCTCT ATGCATTACC CCCAATCTAC
CGCCAGGGAG ATTTTGTTCG TGTTGGGTTA TACGAGAACG ACATCGCCAC GTTGATGTTT
TATTACACGC CCAATATGCA GGAGATACTC GACGAACTGA CCCCCTTTGT GAGTTCGCAG
GAGAGGACTG CAATCCAGGA AGTGATTGCC GATCTTGAGC GGCGAATTGC CCGTCTTCGA
CGGGGAAACG TGTAA
 
Protein sequence
MSQCGRMTDA PVVHIGKVIR HAVAFNVQHW QGTTFKVDHL LDAVAELFKV LRERRVNYAL 
VGGIALLTYV QGRNTEDIDL ILSVRSLKKL PELVVTHKDV YFARGNYKGL QVDFLLTTNR
LFSHVKKHHV VTQDFFEQSV PSATVRGLIL LRLYALPPIY RQGDFVRVGL YENDIATLMF
YYTPNMQEIL DELTPFVSSQ ERTAIQEVIA DLERRIARLR RGNV