Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2036 |
Symbol | |
ID | 5539514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2610130 |
End bp | 2610804 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640894171 |
Product | hypothetical protein |
Protein accession | YP_001432142 |
Protein GI | 156742013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAT GCGGTAGAAT GACAGACGCT CCAGTTGTCC ACATTGGGAA GGTTATTCGT CATGCTGTTG CATTCAATGT ACAGCACTGG CAGGGAACAA CGTTCAAAGT GGATCATTTG CTCGATGCAG TAGCCGAATT ATTTAAGGTA CTGCGGGAGC GCCGGGTCAA TTACGCTCTG GTTGGCGGCA TTGCGCTCTT GACGTATGTT CAGGGTCGAA ATACTGAGGA TATTGACCTG ATCCTGAGTG TTCGTTCATT GAAGAAACTT CCTGAGCTTG TCGTTACTCA CAAGGATGTC TATTTTGCTC GAGGAAATTA TAAAGGTCTC CAGGTTGATT TTCTCTTAAC GACGAATCGG TTGTTTTCCC ACGTCAAGAA ACATCACGTA GTCACGCAGG ATTTCTTTGA GCAATCTGTT CCTTCTGCTA CAGTCCGTGG ACTGATACTG CTCAGGCTCT ATGCATTACC CCCAATCTAC CGCCAGGGAG ATTTTGTTCG TGTTGGGTTA TACGAGAACG ACATCGCCAC GTTGATGTTT TATTACACGC CCAATATGCA GGAGATACTC GACGAACTGA CCCCCTTTGT GAGTTCGCAG GAGAGGACTG CAATCCAGGA AGTGATTGCC GATCTTGAGC GGCGAATTGC CCGTCTTCGA CGGGGAAACG TGTAA
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Protein sequence | MSQCGRMTDA PVVHIGKVIR HAVAFNVQHW QGTTFKVDHL LDAVAELFKV LRERRVNYAL VGGIALLTYV QGRNTEDIDL ILSVRSLKKL PELVVTHKDV YFARGNYKGL QVDFLLTTNR LFSHVKKHHV VTQDFFEQSV PSATVRGLIL LRLYALPPIY RQGDFVRVGL YENDIATLMF YYTPNMQEIL DELTPFVSSQ ERTAIQEVIA DLERRIARLR RGNV
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