Gene Rcas_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2034 
Symbol 
ID5539512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2607419 
End bp2608534 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID640894169 
Producthypothetical protein 
Protein accessionYP_001432140 
Protein GI156742011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCTGT ATTTCGCTCC CCTGTCTCAC CGCATAGACG CATGCAGAGG TGTGCTCCAT 
GTTCGGAGAA AGGAAGTGCA GGTTATGACG CCGGTCTATC GGTTCGTGTC GGTTGTGGTG
ATGGTCGTGG TCATCTGGTT CGCCTCTGCA TCGTTTGGTC CGGCGCGCGC GAGTGCGCCA
TTGAACGAAG ACCTGGGATT GACAGCATCA GCCTATGTGC TGACAACACA GGTCACGGAT
GTGGAGCGTG AACCGGCGCT GGCGCCGGTT GCGCAGGCGG GATGGAGCGC CTGGGAAGCG
GTTCCCGGCG CAGTGCTGGC GACATCAGCG CCTTCCGTGA CAACCTGGGG TCGGGATCGC
CTGGAAGTTT TCGTCCGTAG CGATGGTGGG GCGCTCTTAT GGCAGACGTT CGCCAGCGGG
CGCTGGTCGG GCTGGCGCAA CCTCGGCGGC GGGCTGGCAT CGGCGCCATC GTGCGCCGCA
TGGGGGCAGG ATCGCATGAG TTGCTTTGCG CTGCGCCAGG GGAGCAGCGC CGTCTGGCAC
ACCTGGTGGA ATGGCGAGCG CTGGAGCGAA TGGCAGAACC TGGGAGGCGT TGCCACCTCT
GCGCCTGCCG CCGTCTCGTG GGGTGCGCAG CGAGTCGGTG TTTTCGTGCG CGGCAGCGAT
AACAAGATGT ATCAGGCGTA TTACGACGGT CAGCGCTGGA TCAGTTGGAT CAACCACGAA
GGAACGCTCA CCTCGGCGCC TGCCTGCACG TCGCCGGGTG ATAATCAGGT GCAGTGTTTT
GTGCGCGGCA GCAACAACAA ACTCTACCGC CGCGTCTGGA ATAGCGTTCA GTGGACTATC
TGGGAGGACC TGGGAGTCGG CGGAACGTCG GCGCCGTCTG CCGCATCCTG GGGACCCAAC
CGGGTCAGTC TGTTCGTGCG GGGCGACAAT GGCAATCTGT TGCACCGTTA CTGGGATGGA
TCGCGCTGGA TCGGCTGGGA AGACCTCGGC GGCAATATTG CTTCCTCACC GGCCTGCGTC
TCATGGGGCG CCAATAGCCT CGACTGCTTT GCCCAGACGG TTGATCCGGT CTTCAATACC
GATCAGGGGC TGATCCGTCG GTTCTGGCGA GGATGA
 
Protein sequence
MCLYFAPLSH RIDACRGVLH VRRKEVQVMT PVYRFVSVVV MVVVIWFASA SFGPARASAP 
LNEDLGLTAS AYVLTTQVTD VEREPALAPV AQAGWSAWEA VPGAVLATSA PSVTTWGRDR
LEVFVRSDGG ALLWQTFASG RWSGWRNLGG GLASAPSCAA WGQDRMSCFA LRQGSSAVWH
TWWNGERWSE WQNLGGVATS APAAVSWGAQ RVGVFVRGSD NKMYQAYYDG QRWISWINHE
GTLTSAPACT SPGDNQVQCF VRGSNNKLYR RVWNSVQWTI WEDLGVGGTS APSAASWGPN
RVSLFVRGDN GNLLHRYWDG SRWIGWEDLG GNIASSPACV SWGANSLDCF AQTVDPVFNT
DQGLIRRFWR G