Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2034 |
Symbol | |
ID | 5539512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2607419 |
End bp | 2608534 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894169 |
Product | hypothetical protein |
Protein accession | YP_001432140 |
Protein GI | 156742011 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGTCTGT ATTTCGCTCC CCTGTCTCAC CGCATAGACG CATGCAGAGG TGTGCTCCAT GTTCGGAGAA AGGAAGTGCA GGTTATGACG CCGGTCTATC GGTTCGTGTC GGTTGTGGTG ATGGTCGTGG TCATCTGGTT CGCCTCTGCA TCGTTTGGTC CGGCGCGCGC GAGTGCGCCA TTGAACGAAG ACCTGGGATT GACAGCATCA GCCTATGTGC TGACAACACA GGTCACGGAT GTGGAGCGTG AACCGGCGCT GGCGCCGGTT GCGCAGGCGG GATGGAGCGC CTGGGAAGCG GTTCCCGGCG CAGTGCTGGC GACATCAGCG CCTTCCGTGA CAACCTGGGG TCGGGATCGC CTGGAAGTTT TCGTCCGTAG CGATGGTGGG GCGCTCTTAT GGCAGACGTT CGCCAGCGGG CGCTGGTCGG GCTGGCGCAA CCTCGGCGGC GGGCTGGCAT CGGCGCCATC GTGCGCCGCA TGGGGGCAGG ATCGCATGAG TTGCTTTGCG CTGCGCCAGG GGAGCAGCGC CGTCTGGCAC ACCTGGTGGA ATGGCGAGCG CTGGAGCGAA TGGCAGAACC TGGGAGGCGT TGCCACCTCT GCGCCTGCCG CCGTCTCGTG GGGTGCGCAG CGAGTCGGTG TTTTCGTGCG CGGCAGCGAT AACAAGATGT ATCAGGCGTA TTACGACGGT CAGCGCTGGA TCAGTTGGAT CAACCACGAA GGAACGCTCA CCTCGGCGCC TGCCTGCACG TCGCCGGGTG ATAATCAGGT GCAGTGTTTT GTGCGCGGCA GCAACAACAA ACTCTACCGC CGCGTCTGGA ATAGCGTTCA GTGGACTATC TGGGAGGACC TGGGAGTCGG CGGAACGTCG GCGCCGTCTG CCGCATCCTG GGGACCCAAC CGGGTCAGTC TGTTCGTGCG GGGCGACAAT GGCAATCTGT TGCACCGTTA CTGGGATGGA TCGCGCTGGA TCGGCTGGGA AGACCTCGGC GGCAATATTG CTTCCTCACC GGCCTGCGTC TCATGGGGCG CCAATAGCCT CGACTGCTTT GCCCAGACGG TTGATCCGGT CTTCAATACC GATCAGGGGC TGATCCGTCG GTTCTGGCGA GGATGA
|
Protein sequence | MCLYFAPLSH RIDACRGVLH VRRKEVQVMT PVYRFVSVVV MVVVIWFASA SFGPARASAP LNEDLGLTAS AYVLTTQVTD VEREPALAPV AQAGWSAWEA VPGAVLATSA PSVTTWGRDR LEVFVRSDGG ALLWQTFASG RWSGWRNLGG GLASAPSCAA WGQDRMSCFA LRQGSSAVWH TWWNGERWSE WQNLGGVATS APAAVSWGAQ RVGVFVRGSD NKMYQAYYDG QRWISWINHE GTLTSAPACT SPGDNQVQCF VRGSNNKLYR RVWNSVQWTI WEDLGVGGTS APSAASWGPN RVSLFVRGDN GNLLHRYWDG SRWIGWEDLG GNIASSPACV SWGANSLDCF AQTVDPVFNT DQGLIRRFWR G
|
| |