Gene Rcas_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2032 
Symbol 
ID5539510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2604866 
End bp2605849 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content62% 
IMG OID640894167 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001432138 
Protein GI156742009 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.787355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATCA ATCGTCCACG ACGATTACGC CGCACTCCCG CACTGCGGCG CATGGTGTGC 
GAAACCGTGT TGAGCGCCGA CGATCTGATC GCGCCACTCT TCGTTGTCGC CGGCAGCGGC
GTTGTGCGTC CGATCCGCTC GATGCCGGGG CATGCCCAGA TATCGGTCGA TCAACTTGAC
CCTGAAATCA GCGAAATCGC CGAACTCCAG ATACCGGCTG TCCTCCTGTT TGGCATTCCA
GCGCACAAAG ACCCGACCGG CAGCAGTGGT TGGGACCCGG AGGGTCCGGT GCCACAGGCG
ATTCGCGCCA TCAAGCGGCT TGCTCCTCAA TTGACCGTTA TCGCAGATGT GTGCGTCTGT
GAGTACACCA GCCATGGACA TTGCGGTATT CTGGCGGAGA CGCCTGGCAG TGGCGATGTG
CTCAACGATC CGACGCTCGA AATTCTGGCG CGTTGTGCCG TGGCGTATGC CGATGCCGGC
GCCGACATCG TTGCTCCCAG CGCCATGATG GATGGTCAGG TCGCTGCGAT TCGCGCCGCT
CTCGACGCCG CAGGTTATAC GCAGGTCGCT ATCCTGTCGT ATGCCGCCAA GTTTGCGTCC
GCCTTCTACG GACCATTCCG TGAAGCCGCC GAGTCTACGC CAGCGTTCGG CGACCGGCGC
GCCTATCAGA TGGACCCGGC GAACGGACGT GAGGCGTTGC GTGAGGTGGA ACTCGATATT
GCCGAAGGCG CCGATATGAT CATGGTCAAA CCGGCAGGCG CGTATCTCGA CATTATCAGC
ACGGTGCGGC AGCGCTATCA TGTGCCGCTG GCAGCGTATC AGGTGAGCGG CGAGTATGCC
ATGATCAAAG CGGCGGCGCA ACTCGGTTGG CTCGACGAGC GCCGCGCCGC CCTCGAAAGT
CTGATCGCCA TTCGCCGCGC CGGAGCGGAT ATGATCATCA CCTACTTCGC CAAGGATGCC
GCGCGCTGGA TTGCTGCGGA GTGA
 
Protein sequence
MLINRPRRLR RTPALRRMVC ETVLSADDLI APLFVVAGSG VVRPIRSMPG HAQISVDQLD 
PEISEIAELQ IPAVLLFGIP AHKDPTGSSG WDPEGPVPQA IRAIKRLAPQ LTVIADVCVC
EYTSHGHCGI LAETPGSGDV LNDPTLEILA RCAVAYADAG ADIVAPSAMM DGQVAAIRAA
LDAAGYTQVA ILSYAAKFAS AFYGPFREAA ESTPAFGDRR AYQMDPANGR EALREVELDI
AEGADMIMVK PAGAYLDIIS TVRQRYHVPL AAYQVSGEYA MIKAAAQLGW LDERRAALES
LIAIRRAGAD MIITYFAKDA ARWIAAE