| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2030 |
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| Symbol | hemC |
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| ID | 5539508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2602556 |
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| End bp | 2603467 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894165 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001432136 |
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| Protein GI | 156742007 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.550332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.807952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATT CGCTGACCAT TGGCACGCGC GCCAGCAAAC TGGCGCTGGT GCAGACGCAC
ATGATCCGCG ATGCGTTGCA GGCGGCGCAT CCGGGATTGA CCGTTGCTGT TGAACGGATT
ACGACGCGCG GCGACATTAT TCTTGACCGT CCGCTCAATG CAATCGGTGA TAAAGGACTG
TTCGTCGTCG AAATCGAGGA GGCGATGCGC GCTGGCAGGG TCGATCTGGC GGTTCATAGC
GCCAAAGATC TGCCCTCGAC GCTGCCTCCC GATATGACCC TGGCTGTCTG CCCGCGCCGT
GCCGATCCGC GTGATGCGCT GGTGGCGCAG CCGGGCATGA CGCTTGCTTC CCTGCCGCAT
GGCGCGCGCG TTGGCACGAG CAGCCTGCGG CGCGCCTGTC AGTTGCGCGC CCTGCGCCCC
GATCTGACGC TGCTCGATCT GCGCGGAAAT GTCGATACGC GGTTGCGCAA GTTGCGTGAA
GGGCAGTACG ATGCCATCGT GCTCGCGGCA GCCGGGTTGA AGCGGCTGGG TCTCGAAGAG
GTTATTACGG AACTGCTCGA ACCAGATGTG CTGATACCGG CGGTTGGGCA GGGAATTATC
GGCGTCGAAG CGCGCGCCGG CGATGATGAG GTGCTGCGTC TGCTGGCGCC GCTCGATGAT
CCGGCAGCGC GCGCCGCGAT CACGGCTGAG CGCGCATTTC TGGCGCGTAT CGGTGGTGGT
TGCCGGGTTC CGGTCGGAGC GCTGGCGCTC CTCGAAGGCG ATGAATTGCT GCTGTACGGG
ATGATCGGCG CACTGGACGG GCGTATGGTG CGCGGTATGC GGAGCGGATC AGCATCGGAC
CCTGCCGGTC TGGGATCGGC GCTGGCGGAA GAACTGCTCG ATGCAGGCGG GCAGGCGTTG
CTCGCAGGGT AA
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| Protein sequence | MRNSLTIGTR ASKLALVQTH MIRDALQAAH PGLTVAVERI TTRGDIILDR PLNAIGDKGL
FVVEIEEAMR AGRVDLAVHS AKDLPSTLPP DMTLAVCPRR ADPRDALVAQ PGMTLASLPH
GARVGTSSLR RACQLRALRP DLTLLDLRGN VDTRLRKLRE GQYDAIVLAA AGLKRLGLEE
VITELLEPDV LIPAVGQGII GVEARAGDDE VLRLLAPLDD PAARAAITAE RAFLARIGGG
CRVPVGALAL LEGDELLLYG MIGALDGRMV RGMRSGSASD PAGLGSALAE ELLDAGGQAL
LAG
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