Gene Rcas_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2029 
Symbol 
ID5539507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2601618 
End bp2602559 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content62% 
IMG OID640894164 
Productferrochelatase 
Protein accessionYP_001432135 
Protein GI156742006 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.317872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC ACGCACCGCC AACGGGTATT TTTTTGCTTG CCTATGGCAC GCCGGAGAGT 
CTCGACGATG TCGAGCCGTA CTTTACCCAC ATTCGTGGTG GGCGCACGCC ATCACCGGAG
GCGGTGGCGA ACCTGCGTGA ACGCTATCGG CTGGTTGGTG GACGCACGCC GCTCAAGGAC
CTGACCTTCG CTGTGGCCGA CCGGTTGCAG GCGCGGCTCG ATGCGCAATC GCCGGGTCGG
TATCGCGTCT ATGTCGGCAT GAAGCACTGG CATCCATTTA TTGCCGAAAC TGTGCCACGG
ATTGCGCGCG ATGGGGTGCG CGAGGTTGTG GCGCTCGTTC TTGCGCCCCA CTATTCTCGA
ATGAGCGTCG GCGGCTACCG CAAGTACCTT GACGAAGCGA ATGGCGCGCT TCCGCAGCCG
CTCCAGGTGA CATTCATCGA ACGCTGGCAC GATGATCCAG GATTCCGGCG GTTGATTGCA
GATCGCATCA CGGAGGCGCG CGTCACCTTG CCTCCTGATC TGCGCAACGA AGCGCTGGTT
CTCTTCAGTG CGCACAGTCT GCCGGAGCGC ATTCTGTCGT GGAACGACCC ATACCCCGAC
GAACTGCGTG AGAGTGCGTC CGGCATCGCG GCGTTGCTGG GCTTGACCGA CTGGCGTCTC
TGCTATCAGA GCGCGGGGAT GACCGGCGAA CCGTGGCTGG GTCCCGACAT TCTCGATTAC
CTGGAAGAAC TGCACAACGA AGGGGTGCGC GCCGTGATCA GCGCGCCGTT CGGGTTCGTT
GCCGACCATC TCGAGGTGCT GTGGGACATC GACCACGAGG CGCAAGAGAA GGCTGCGGAG
TTGGGGATGA CGCTCCGCCG CATTCGAATG CCGAACGCCG ATGATGAGTT TGTGGACGTG
CTGGTGGCGC TGCTTCGTGC TGCGCTGGGA AAGCGTCTAT GA
 
Protein sequence
MTDHAPPTGI FLLAYGTPES LDDVEPYFTH IRGGRTPSPE AVANLRERYR LVGGRTPLKD 
LTFAVADRLQ ARLDAQSPGR YRVYVGMKHW HPFIAETVPR IARDGVREVV ALVLAPHYSR
MSVGGYRKYL DEANGALPQP LQVTFIERWH DDPGFRRLIA DRITEARVTL PPDLRNEALV
LFSAHSLPER ILSWNDPYPD ELRESASGIA ALLGLTDWRL CYQSAGMTGE PWLGPDILDY
LEELHNEGVR AVISAPFGFV ADHLEVLWDI DHEAQEKAAE LGMTLRRIRM PNADDEFVDV
LVALLRAALG KRL