| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2023 |
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| Symbol | |
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| ID | 5539501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2595280 |
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| End bp | 2595861 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894158 |
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| Product | PfpI family intracellular peptidase |
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| Protein accession | YP_001432129 |
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| Protein GI | 156742000 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.297632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA AGAACATCTT GATGCTCGTT GGCGATTACG TCGAGGATTA CGAAGTTATG
GTTCCGTTCC AGGCGCTTCA GGCGGTTGGT CACACCGTCC ACGCCGTCTG CCCCGATAAG
AAGGCAGGCG ATAAGGTACG CACGGCAGTT CACGATTTCG AGGGAGATCA GACGTACAGT
GAGAAGCCGG GGCACAACTT CGCACTCAAC GCAACATTCG CCGAAGTTCG AGCTGAAGAC
TACGACGCAC TCGTGATCCC TGGCGGACGC GCGCCGGAGT ACATCCGCCT GAACGAGAAG
GTGCTGGACA TCGTCCGCCA TTTTGCGGCT GCCAACAAGC CGATTGCCGC CATCTGCCAT
GGCGCGCAGG TGCTGGCTGC GGCAGGCGTC CTGGAGGGCA GGTCATGCTC TGCATACCCG
GCAGTTGGTC CTGACGTTAA TCGCGCCGGG GGGCGGTATG TCGATATTCC ATCCAACAAA
GCGCATGTCG ACGGCAACCT GGTGACGGCG CCCGCCTGGC CCGCGCATCC TGAATGGATT
GCGAAATTCC TTCAGGTGTT GGGCACGAGG ATCGAACTGT AG
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| Protein sequence | MAAKNILMLV GDYVEDYEVM VPFQALQAVG HTVHAVCPDK KAGDKVRTAV HDFEGDQTYS
EKPGHNFALN ATFAEVRAED YDALVIPGGR APEYIRLNEK VLDIVRHFAA ANKPIAAICH
GAQVLAAAGV LEGRSCSAYP AVGPDVNRAG GRYVDIPSNK AHVDGNLVTA PAWPAHPEWI
AKFLQVLGTR IEL
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