| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2021 |
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| Symbol | |
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| ID | 5539499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2591656 |
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| End bp | 2593830 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894156 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001432127 |
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| Protein GI | 156741998 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC TTCCCGCCGT TCTGTCGCTT GATGGCGCAT GGAAACTACT GCCGGTCAAT
GCGTTTCGTC AGGGATTCTA CCCAACCGAC GATGACACAT GGCTGACCCA GGAGATTCCG
GCGCATTGGC AACAGCATCC GCTGCTGGAG CGCTATGCGG GATGTATGGT CTACCGCCGG
CGCTTCCGCC TGCCAGATGC GCTGGCAGGC ACAACCGCGC AATCACTGCC AATCCGGTAT
TTCCTGCGCT TCAATGGTGT GTTTTACTGG GCGCAGCCCT ATTTCAACGG CGTTGATCTT
GGGCGTCACG AGGGGTATTT CGAGCCGTAT GAGCGTGAGG TGACCGCCTG GATCGCGTCG
GAGAACGAGA TCGTCGTTGA GGTCGAGTGC CCCGATGAAG CCAATAAATC GGGCAAGCGC
CTGATCACCG GCATTTTCTC GCACTGGGAC TGCATGGACC CGCTCGCCAA CCCCGGTGGC
ATCTGGTTGC CGGTCGAACT GATCGCCGCC GGTCCGGTAC GGGTGCGCAA TCTGCTGCTG
CACACCGAAG CGGCTGGCGA GACGCTGGCG GAATTGCGCT TCCGCGCCGT CTTCGACGCA
GACGTGGCGC GTGACGTGAC GCTGCGCTGG ACGTTTGCGC CGGTCAACTT TGCGGGAGCG
GTGCAGACGA CTGAGCAACG CCGCGCGCTG GCAGCCGGGG AACACGAGAT TGTCGGGGTG
TTGTTGGTGC GCGACCCGCA TCTTTGGTGG CCCCACGATA TGGGAGCGCC GGATTTGTAT
GCGGTCACGC TCGAGGTTCT CTGTGACGGT GTGGTTTCGG ACTCGCGCAC CGTTCGTTTC
GGCATCCGCA CGTTCGAGTT GCACGACTGG ATACCCTATC TTAACGGCGC CCGCTTTTTC
ATCAAGGGGA ACAATTATCC GCCAACCGAT GTGCGCATTG CAACGACGAC GCGCGAACGG
TGTCTCGAGG ACCTGCGCCT GGCGCGTGCG TGCCATATGA ACATGCTGCG GGTGCATGGA
CATATTGCGC ATCCGGCGCT CTACGACGCC GCCGATGAGA TGGGCATGCT GCTCTGGCAG
GATTTCCCGC TCCACTGGCT CTACCGCCGT GATGTGCTGC CCGAAGCCCG CCGTCAGGCG
CGCGCTATGG TGCGTCTGTT GGGGAACCAT CCCTCGGTGG CGCTCTGGTG TATGCACAAC
GAACCGGTGT ACGTCGTTGA TACCCGCGAT GAACGGATGC TGACGCGCGT GCGCACGTAT
GCATCAATGT TCGTCTTCAG CTGGAACCGC GATGTGATGG ACAGCGAGTT GAAGCGGGTG
GTCGAACGGG AAGACGGCAG ACGACCGGTG GTGCGTTCGT CGAACGAGTT TCCCATTCCG
GGCATTCGCG CCGGCGCCAG TACACATTTC TACTATGGTT GGTACACAAT CTATGGGCGC
CTCGAAGCGT GGGAGCCGTT GATCCGGCGC TTCCCGCAGT TGGTGCGCTT TGTCACCGAG
TTTGGCGCGC AGAGTTTCCC GAATGTCGAG AGTTGCGTCA GGTTCATGGA CGCCGACATC
AGGCGCATCG ACTGGCAGCG TCTGGTTGAG CGTCATCAGT TTCAGGCGGA CATTATGGCG
CACTGGTACG ATTGGCGCGC GGCACGTTCG CTCGAAGAAC TGGTGCAGAT GTCGCAGGAG
TATCAGATTA AGGTCAACCG CCACTATATT GATCGGTTGC GTTTGCGCAA GTATCGCCCA
ACTGGCGGCA TGATGCCATT CATGTTCCAT GATGCCAATC CTTCGGTCTC CTGGTCGATC
ATCGACTACT GGCGCGTTCC GAAACGGTCA TACGAGGCAA TGCGCCTGGC GTTCAGTCCG
CACTATATCT TCACCGTGCT GGAAAAAGAA GCCATCGCTC TCGATGAAAC GCTCGATTTA
CCGGTTTATG TGGTCAACGA CGCTCACCGC GATCTGGCGG TGACGGCGAC CGCGCGCCTG
GTTGGTCCTG GCGATGCAGT GCTGGCGACT GTCGAGCGAT CCTTCACATT GCCCGCCGAC
TGTATGACAA TGGAGATCGA GCGGTTGCGC CTGATCCCGT CGGAACCCGG AACGTATCGT
CTGGAATTGA CGCTGGATGG CGATCTGGCG GAAGTTATTG TCAACGCCTA TGCGATTCAT
GTCTCGGTTG GTTAG
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| Protein sequence | MTNLPAVLSL DGAWKLLPVN AFRQGFYPTD DDTWLTQEIP AHWQQHPLLE RYAGCMVYRR
RFRLPDALAG TTAQSLPIRY FLRFNGVFYW AQPYFNGVDL GRHEGYFEPY EREVTAWIAS
ENEIVVEVEC PDEANKSGKR LITGIFSHWD CMDPLANPGG IWLPVELIAA GPVRVRNLLL
HTEAAGETLA ELRFRAVFDA DVARDVTLRW TFAPVNFAGA VQTTEQRRAL AAGEHEIVGV
LLVRDPHLWW PHDMGAPDLY AVTLEVLCDG VVSDSRTVRF GIRTFELHDW IPYLNGARFF
IKGNNYPPTD VRIATTTRER CLEDLRLARA CHMNMLRVHG HIAHPALYDA ADEMGMLLWQ
DFPLHWLYRR DVLPEARRQA RAMVRLLGNH PSVALWCMHN EPVYVVDTRD ERMLTRVRTY
ASMFVFSWNR DVMDSELKRV VEREDGRRPV VRSSNEFPIP GIRAGASTHF YYGWYTIYGR
LEAWEPLIRR FPQLVRFVTE FGAQSFPNVE SCVRFMDADI RRIDWQRLVE RHQFQADIMA
HWYDWRAARS LEELVQMSQE YQIKVNRHYI DRLRLRKYRP TGGMMPFMFH DANPSVSWSI
IDYWRVPKRS YEAMRLAFSP HYIFTVLEKE AIALDETLDL PVYVVNDAHR DLAVTATARL
VGPGDAVLAT VERSFTLPAD CMTMEIERLR LIPSEPGTYR LELTLDGDLA EVIVNAYAIH
VSVG
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