| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2013 |
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| Symbol | |
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| ID | 5539491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2579892 |
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| End bp | 2580953 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894148 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001432119 |
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| Protein GI | 156741990 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.441029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATA ACGATGACCA CACACACGCC TCTGCCGGCG CATTGCCGGC GCTCCTGCAC
GATTCCGGGC TTGATGCCGC GACCCTGATC AACTACTACC GGCAGATGGT GCTCATCCGG
CGCTTCGAGG AGAAGTGCCA GGAGATGTAT ACCAAAGCCA GGATCGGAGG CTTTCTCCAT
CTGTACATCG GTGAAGAGGC GACGGCGGTC GGTGCGATTT CCGCGCTGCG CCCGGAAGAC
CATATCTTCA CCCATTACCG TGACCATGGG CACGCGATTG CCCGTGGGCT TGACATCAAC
GCGCTCATGG CGGAATTGTT CGGGAAGGTG ACCGGTTGCT CCAAAGGATT GGGCGGATCG
ATGCACTTTG CCGACGCCAG CAAGAACTTC TGGGGCGGGT ATGCGATTGT CGGCAGCCAC
CTGCCGCTGG CAGTCGGTGT GGCGCTTGGC ATGAAGATGC AGCGTAGGGA CTCGGTCGTG
ATGGTGTTCT TTGGCGACGG CGCCACCAAT GGCGGTGAGT TCTACGAGTC GCTCAACTTT
GCACAACTCT GGAAGTTGCC GGTAATCTTT GTGTGCGAAA ACAACCTCTA TGCAATGGGT
ACGCCGCTGG AGGTCCACTC GTCGGTGACC GAGATCTACC GCAAGGCGTG CGCGTTCGAT
ATGAAAGCCG AACGGGTGGA CGGCAACGAT GTGCTGGTGA TGCGCGACGC GGCGCTGCGC
GCCGTCGAGT ACGCGCGTTC GGGCAGAGGT CCGGTGTTGC TCGAGGCGAT GACATACCGA
TTCCGCGGCC ACTCGGCGCA GGATACGCAA AAGTATCGCT CGAAAGAAGA CATCGAACGT
CACCGACGCA ATGATCCGAT TGCCCGCTTC CGCGCCATGC TGGTGCAGGA AGGTATTGCA
ACCGAACAAC AACTGCGCGA TATTGATCGC ATGATCGATG ATCAGGTCGA AGCCGCCGTG
CGGTTTGCCG ACGAAAGCCC GGAACCAGGG CACGAATGGA TTACGCAGAC GGGAGTCTAC
GCCGCGCCAA TCGCGGTCAA TCCCCCCATC CATGGAGAAT AA
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| Protein sequence | MAHNDDHTHA SAGALPALLH DSGLDAATLI NYYRQMVLIR RFEEKCQEMY TKARIGGFLH
LYIGEEATAV GAISALRPED HIFTHYRDHG HAIARGLDIN ALMAELFGKV TGCSKGLGGS
MHFADASKNF WGGYAIVGSH LPLAVGVALG MKMQRRDSVV MVFFGDGATN GGEFYESLNF
AQLWKLPVIF VCENNLYAMG TPLEVHSSVT EIYRKACAFD MKAERVDGND VLVMRDAALR
AVEYARSGRG PVLLEAMTYR FRGHSAQDTQ KYRSKEDIER HRRNDPIARF RAMLVQEGIA
TEQQLRDIDR MIDDQVEAAV RFADESPEPG HEWITQTGVY AAPIAVNPPI HGE
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