Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2011 |
Symbol | |
ID | 5539489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2577544 |
End bp | 2578908 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640894146 |
Product | dihydrolipoyllysine-residue succinyltransferase |
Protein accession | YP_001432117 |
Protein GI | 156741988 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.39868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACA TTACCATGCC CAAGATGGGC TTCGACATGC AGGAGGGCAC GATCGTTCGC TGGCTGAAGA AGCCAGGTGA CGAGGTTCGC CGCGGTGAGC CAATTGCCGA AATCGAGACG GATAAGGTGA CTATTGAGAT CGAGGCGTTT GAGTCCGGCA CTCTCACCGA GATTGTCGTG CCGGAAGGAC AGTCGGCGCC GGTCAATGCG GTCATTGCTC GACTTGACGG CGGCAACGGA GCGCAACCGC CCGCCCCCGC ACCGATCGCC GAAGCGCCTG CACCCGCGTC CGTCGCTGAA GCGCCTGCAC CTGCCACACC CGAGCCGGTT GTCGCGGCGC CCGCCGTGGA AGTGGGAGAG GTCCGCGCAT CACCGCTGGC GCGTCGTCTG GCGCGCGAAC ATGGGGTCGA TCTGCGCCAG GTGCGCGGTA GTGGCCCGGC AGGGCGCATC GTGAAGGAAG ACATCGAAGC GTACCTGACT GCGCGCGGCG CGGCGCCGGC GCCTGCTCCG ACACCCATGC CAAAGGCGCC GGCGCCGGTC CCCACACCTG TACCAACGGC GCCCGCCCCT GCACCTGCGC CGGCAATGGC TGCGCCGACG CCAGCAGTGC AGCCCGCGCC GACGCCAGCA GCGCCCGTTG CGCCGCCAAC GCCTGCACTG GTCGGCGCGC CGCTGGCCGC CGTCGTACCG CTGAGCAATA TGCGCAAGAC CATTGCGCGC CGCATGCTGC AAAGCTGGCA GCAGTTTCCG CACATCTTTG TGTCTATCGA AGTCGATATG GGTGCAGCGC TTGCATTGCG CGCGCAGGCG AACGCCGGAC GGGCAAAAGA GGAACAGTTC TCGGTCAACG ATATGGTGGT CAAAGCGTGC GCTGGCGCGC TGCTCGCCTT TCCCAATCTC AACGCCTCCT ATAGCGACGA AGGGATCATC CGGCATCCGA TGGTCAATAT CGCCATTGCG GTCGCATTGG AGAGCGGGCT GATGGCGCCG GTTGTGACCA ATTGCCAGGA CCGCTCACTC GGTTCGATTG CGCGCGAGAC CAAACGGGTC GTTGTGCTGG CGCGCGAGGG GAAGATCACC CCCGATCTGC TTCAGGGAGG CACGTTTACG GTCAGTAATC TGGGGATGTA CGGCATCACT GAATTCACAT CGATCATCAC GCCGCCGCAA GCCGCCAGCC TGGCGGTCGG CACAATCCGG CGCGTCCCGG CGTTCAAAGA CGACAGCGAC GAGGTGGTGG CAAAACATCT GATGATGCTG ACCCTCTCGG CGGACCACCG CGTCACCGAC GGCGCTGAGG CGGCTCAGTT TCTCAACGAG GTGAAACGCC TGTTGGAGCA ACCACTGGCA CTGCTGGTAG GGTGA
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Protein sequence | MPDITMPKMG FDMQEGTIVR WLKKPGDEVR RGEPIAEIET DKVTIEIEAF ESGTLTEIVV PEGQSAPVNA VIARLDGGNG AQPPAPAPIA EAPAPASVAE APAPATPEPV VAAPAVEVGE VRASPLARRL AREHGVDLRQ VRGSGPAGRI VKEDIEAYLT ARGAAPAPAP TPMPKAPAPV PTPVPTAPAP APAPAMAAPT PAVQPAPTPA APVAPPTPAL VGAPLAAVVP LSNMRKTIAR RMLQSWQQFP HIFVSIEVDM GAALALRAQA NAGRAKEEQF SVNDMVVKAC AGALLAFPNL NASYSDEGII RHPMVNIAIA VALESGLMAP VVTNCQDRSL GSIARETKRV VVLAREGKIT PDLLQGGTFT VSNLGMYGIT EFTSIITPPQ AASLAVGTIR RVPAFKDDSD EVVAKHLMML TLSADHRVTD GAEAAQFLNE VKRLLEQPLA LLVG
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