Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2010 |
Symbol | |
ID | 5539488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2576295 |
End bp | 2577407 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640894145 |
Product | DNA methylase N-4/N-6 domain-containing protein |
Protein accession | YP_001432116 |
Protein GI | 156741987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0863] DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.393522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTCG TCACGCCAGA TTCATGCCGC CTCCCCATCA ATGCAATTAT CCAGGGTGAT TGCATTCAGG TTTTGCAGAT GTTCCCCGAG CAGTCGGTAG ACCTGATTTT CGCCGATCCC CCCTACAATC TTCAGTTGCG TCACGCATTG CTCCGTCCCG ATCAAACGGT CGTGGACGGG GTTGATGATG CCTGGGATCG GTTTGAAGAT GTTCAGGAGT ATGATGCATT CACCAGAGCC TGGCTTGGCG CTTGTCGCAG GGTGCTCAAG GACGATGGCA CGATCTGGGT GATCGGCACG TACCATAATA TCTTTCGTGT CGGCGCGATC ATGATGGATC TGGGGTACTG GATATTGAAC GATGTTATCT GGCACAAAAC AAATCCGATG CCCAATTTCC GCGGCGTTCG CTTCCAGAAC GCAACCGAAA CATTGATATG GGCGAAGAAG TCTGCCGATC AGAAGAAATA TACGTTCAAT TACCACGCAA TGAAGCATCT GAATGAAGAG AAGCAGATGC AGAATGTCTG GCATCTTCCG CTCTGCACCG GCGCGGAACG GGTGAAGATC AATGGCAAGA AGGCGCACTC GACGCAAAAA CCGGAAGCGC TGTTGTACCG GGTGATACTG TCATCGAGCA ATCCTGGCGA TCTGGTCCTT GATCCATTTT TCGGTTCGGG CACAACTGGA GTAGTCGCGC GCAGACTGAA GCGACATTAT ATTGGCATCG AGTTGGATCC GGCGTATGTC GAAATCGCCA GAACACGGAT CGAGAAGACA CCAGTATCCG TATGCGATGA TGCGATGCTC GCAACGCGAT CGAAACGGGA CATGCCGCGT GTCGGTTTTG GTCAACTTGT GGAGGCGCAG TATCTTCGCG TCGGTCAGAA TCTCTACTCA AGCGATCGAA ACGTTGTGGC AATCGTCCGC GCGGACTCAC AACTGCAATG GGGCAATATC ACCAGCTCCA TCCACAGAAT AGCCGCGCTT GCTCAGCATA AGCCCGCCTT CAATGGCTGG GAGTACTGGC ACTATGAGGA TCAGGCGGGT CGTCTTGTCA GCATCGATTC TCTTCGTGAA CAATATCGGT TCGACCAGGG CGTAGCGGAT TGA
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Protein sequence | MQVVTPDSCR LPINAIIQGD CIQVLQMFPE QSVDLIFADP PYNLQLRHAL LRPDQTVVDG VDDAWDRFED VQEYDAFTRA WLGACRRVLK DDGTIWVIGT YHNIFRVGAI MMDLGYWILN DVIWHKTNPM PNFRGVRFQN ATETLIWAKK SADQKKYTFN YHAMKHLNEE KQMQNVWHLP LCTGAERVKI NGKKAHSTQK PEALLYRVIL SSSNPGDLVL DPFFGSGTTG VVARRLKRHY IGIELDPAYV EIARTRIEKT PVSVCDDAML ATRSKRDMPR VGFGQLVEAQ YLRVGQNLYS SDRNVVAIVR ADSQLQWGNI TSSIHRIAAL AQHKPAFNGW EYWHYEDQAG RLVSIDSLRE QYRFDQGVAD
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