Gene Rcas_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2009 
Symbol 
ID5539487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2575835 
End bp2576266 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content58% 
IMG OID640894144 
ProductCBS domain-containing protein 
Protein accessionYP_001432115 
Protein GI156741986 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.416479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACACA AACGTGTCAG TGATGTCATG CACTATGGCG TTATTTCGTG CCGGGTCGAA 
ACGCCGGTCG AGGAGGCGCT GGCGCTTATG CAAGAGCACC GCATCCACGC ACTCGTGATC
GTTGATGGAC CTGGCTACCT TGCCGGGATT GTGTCGCAGA CCGACCTGCT GCGGGCTTGG
AAGGAAGGGT CGTCGTTTGA AGCGGTGATG CGCGGACCGG TCGGCGACAT TATGACCCGC
AGTGTTGTCA CCTGTATGCC CGAAATGGAA CTCGACCGCG CTATTCAGTT GCTCAATCGC
AATCATATCC ATCGCCTCGT CGTTGTCGAA GAGCGCAACG ATGGGCGCTT CTGGCCCATA
GGCGTGCTGT CGATGACCGA CATTGTGCGC GCACTAGAGG GCGAAGGGCT TGGTATGGGA
CGTTCATCGT AG
 
Protein sequence
MEHKRVSDVM HYGVISCRVE TPVEEALALM QEHRIHALVI VDGPGYLAGI VSQTDLLRAW 
KEGSSFEAVM RGPVGDIMTR SVVTCMPEME LDRAIQLLNR NHIHRLVVVE ERNDGRFWPI
GVLSMTDIVR ALEGEGLGMG RSS