| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2004 |
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| Symbol | |
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| ID | 5539482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2571914 |
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| End bp | 2572879 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894139 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001432110 |
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| Protein GI | 156741981 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.532666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.656208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCTG AGCGGGTTCA GAGTAAGGCA GCACGATTAC GCCGAATCGA ACACCTGCTC
TACAACGCCC CCGGCGGTCT GCGTGTCGTC GATCTTGCGG AGCGCTGCGG CGTTGATCGC
CGCACGATCT ACCGTGACCT TGCGGCCCTC GAAGAGATGG GCGCGCCGGT CTGGCAGCAG
GGCGGGCGCT ATGGCATTGA ACGCGACTCG TACCTTTCGA CGGTGCGCCT GAACCTCAAC
GAGGCTGTGG CCCTCTTCTT CGCAGCGCGG CTGCTTGCCC ACCACAGCGA CGAACACAAC
CCGCATGTCG TTTCGGCGCT GCAAAAACTG GCGACAAGCC TGCCCGACGC GACTGTGTCA
TCACATATCG CTCGCGTTGC CGACCTTATT CGTGAGCGGG CGCATCGGAC GGCGTACATC
CGGGTGCTCG AAACGATCAC CCGCGCCTGG GCTGACCGGC GGTGCGTTAC GATTGACTAT
CGCGCGGCAA GCGGTGATGT GACCCAACGG GTGATCGAGC CATATGTGCT GGAAGTGGCG
CGGAGCGAAC CGGCATCCTA CGTGGTTGCG CACGATCGGC TACGCGGCGC GTTGCGCACC
TTTAAACTCG AACGCATCGC GCAGGCGACG ATACTGGACG AGACCTACAC CATTCCTGAC
GATTTCGACC CCTATGCGCA TTTTGGCGCT GCCTGGGGGG TGATCAACGA GACTGAGGTC
GAGGTGCGCT TGCGCTTCAC CGGCGACGCT GCGCGACGGG TGCGTGAAAG CGTCTGGCAC
CACAGCCAGC AGATCATCGA GCGCGCCGAT GGCGGGTGCG ACATGGTCCT GCGGGTCGGC
GGCGTGCGAG AGATTCGTTC ATGGGTATTG AGTTGGGGAG CGGATGTGGA GGTACTGGCG
CCGGAAGTGC TGCGGAACGA TATTCGCGAT CACGCGCAGC GTCTGGCGGC AATGTATCAG
GACTGA
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| Protein sequence | MTSERVQSKA ARLRRIEHLL YNAPGGLRVV DLAERCGVDR RTIYRDLAAL EEMGAPVWQQ
GGRYGIERDS YLSTVRLNLN EAVALFFAAR LLAHHSDEHN PHVVSALQKL ATSLPDATVS
SHIARVADLI RERAHRTAYI RVLETITRAW ADRRCVTIDY RAASGDVTQR VIEPYVLEVA
RSEPASYVVA HDRLRGALRT FKLERIAQAT ILDETYTIPD DFDPYAHFGA AWGVINETEV
EVRLRFTGDA ARRVRESVWH HSQQIIERAD GGCDMVLRVG GVREIRSWVL SWGADVEVLA
PEVLRNDIRD HAQRLAAMYQ D
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