| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2000 |
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| Symbol | |
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| ID | 5539478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2567786 |
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| End bp | 2568751 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894135 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001432106 |
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| Protein GI | 156741977 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.18395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.875312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAAC GACAGGTTGT TTTTGCCCTG CTGGCGCTCC AACTGATCGG CACGATTCTG
CTGGTCATTG GTCAGGCGAT CAGAAACATT AACGACATTA TCGTTCCGCT TGGCATAGCG
ACGACGTTGA TCATCATCGG GGTGCTGTGG GCGTACTGGC GCGGTTGGGA ACAGGCGGGC
ATCGTGGATA TCATTATCGT GACGATTGCT GTCGGCATTG GAACGCCCGA CATGCTGGTG
CGCCCATACC AGGGGCTGAT CGTCCTGGCG CCGATGGCGC TCGCGCAAAT CCTTGGCGGA
CCGCGCTGGA TTCTGATCAG CATGTTTGGC GTGCTCGCTA TCCTGACCGT GCGCGCCGGA
CCGGAAGCCG GGTACATGAC TGCGTACACG GGCGACCTGC GCACGATCGC GATTTTTGCG
TTCATTGTCC TGAGCATGGC GCTCAGCCGG ATCATCGCCG ATACGGCGAT TCGTAGCGCA
AATGCGAATG CGCAGCGTGC CGAGGAAGCG CGCGCCCGCG CCGACTCGCA GGCAAAGACT
CTGGAGGAGC AAACGCAGGT GTTGCAGGAG CAGAACCGGC GCCAGCAACA GTTGCTCGAC
CTGGTGACGC AACTGGAAAC GCCGGCAATC GTGCTGGCAG AGGGGGTGCT GCTGGCGCCG
GTCGTCGGTC CGATTGATGA TCGACGGGCT GAGGCATTCG TGGGGCGTTT GCTGGAAGTC
GCCAGCGCCC AACGTGCGCA GTTGGTGGTC ATCGACATCG CCGGCGCCTC GAATGTCGAT
GAACGCGCCG CATCGTTGCT TGGGCGCGCT GTGCAGGCGC TGCGCTTGAT CGGGTGCCGC
GTGGCGATCA GCGGCATCTC GGCAGACCTG GCGCGCACCC TGGTGGCGTC CGGCGTTTCG
TTCGATGGCA TCCCGACGGT GCGTACCCCG CGCGAGGCGC TAGAAGCGTA TCGTTCGGTG
GAATGA
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| Protein sequence | MTQRQVVFAL LALQLIGTIL LVIGQAIRNI NDIIVPLGIA TTLIIIGVLW AYWRGWEQAG
IVDIIIVTIA VGIGTPDMLV RPYQGLIVLA PMALAQILGG PRWILISMFG VLAILTVRAG
PEAGYMTAYT GDLRTIAIFA FIVLSMALSR IIADTAIRSA NANAQRAEEA RARADSQAKT
LEEQTQVLQE QNRRQQQLLD LVTQLETPAI VLAEGVLLAP VVGPIDDRRA EAFVGRLLEV
ASAQRAQLVV IDIAGASNVD ERAASLLGRA VQALRLIGCR VAISGISADL ARTLVASGVS
FDGIPTVRTP REALEAYRSV E
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