| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1994 |
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| Symbol | |
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| ID | 5539472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2559648 |
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| End bp | 2561591 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894129 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432100 |
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| Protein GI | 156741971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3211] Predicted phosphatase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0125565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGAC GCGACGAGCA AGACAAACTG ATCGTCCGAT CGGTCGAGGG GAAAGGCAAG
GAATTCGAGC GCATTCTTGA AGAGCGTCTG AGTCGCCGTG ATTTCCTCAA AGCCGCAGCA
GTCACATCGG GACTCGTCGT TGCTGCAACC GCGATGAACG CCGATGTTGC CGCAGCGCAG
ACGCGCCCGG CGCCGTTGCC GCCAAAGTTT GGCAAGGTTG CGCCGACTAC GCCGGAAGTG
GACGAGATCG CTGTGCCGGA TGGCTACTAC GCCGCAACGC TCATTCGCTG GGGGGAGCCG
ATCTTTGCCG ACGCGCCAGA GTTCGATGTC TGGACGCAGA CAAAGGAGAA GCAGGAGAAG
CAGTTCGGCT ACAATTGCGA CTACGTTGGC TACTTCCCGC TGCCGTCGTA CACCTCGAAT
AACTCGACGC GCGGGTTGCT GGTGGTGAAC CACGAGTATA CCAACCCAGA GTTGATGTTC
CCCGGCTACG ATGTCGAGAA TCCCAACCCC ACCAGAACGC AGGTCGATGT CGAACTTGCT
GCGCACGGTG TGTCGGTGAT CGAGGTTGCC CGCGGGCGCG ATGGGCGCTG GAATGTGGTG
CGCAATTCGC CCTATAACCG CCGTCTGACC GGTTACACGC CGATGACGGT CAGCGGTCCG
GCGGCCGATC ACGAGTGGAT GAAGACGAAT GCCGATCCGA CCGGGCGCAA TGTGCTTGGC
ACCCTTAACA ACTGTGCTGG TGGCAAGACG CCGTGGGGCA CGGTGCTGAC CGCCGAAGAG
AACTTCCACC AGTATTTTGC GAACCTGCGA GCGATGCCGA ACAGCGATTA TCGCAAGGCG
ATCCATAACC GCTACGGCAT GCCGAGCGGC GCCTCTGAGC GCAGGTGGGA GAATTTCCAT
GATCGCTTCG ATATTGCAAA GGAGCCAAAC GAAGGCTTCC GTTTCGGCTG GATCGTCGAG
TTTGATCCGT ATAATCCCAA TTCTGTGCCG GTGAAGCGCA CCGCACTCGG TCGCTTCCGC
CACGAAGCGG CAACGATCGT GATTGCGCCA TCCGGTCAGG TCGTGGCGTA CTCCGGCGAC
GATGCGCGCG GTGAGTATGT CTATAAGTTC GTCTCGAACG GGCGCTACAA CCCGCGCAAC
CGTGCGGCGA ACTTCAACCT GCTCGACGAT GGTACGCTCT ATGTTGCGCG CTTCAATGCG
GACGGCACCG GTGAGTGGTT GCCGCTGAAG CACGGCTTTG GTCCGCTGAA TGAGGGCAAT
GGTTTCATGT CGCAGGGCGA TGTGCTGATT AAGACGCGCA ACGCCGCCGA TGCGCTTGGC
GCAACCAAGA TGGATCGCCC GGAGGACATC GAGACCAATC CGGTCAACAA GAAGGTCTAC
ATTATCCTGA CGAATAACAG TCAGCGTGGC GTCGGCAACG GTCCGCCGGT TGATGCCGCC
AATCCGCGCG CCAACAACCG CGCCGGTCAC ATTATCGAAC TGACCGAAGA GGGCAATAAC
CACGCGGCGA CCCGCTTCAC CTGGAATATC TTCATTCTGG CGGGTCTGCC GACCGACGAG
TCAACCTACT TTGCCGGCTA CGACAAGAGC AAGGTCAGTC CGATTGGCGC GCCGGACAAC
ATTGTGTTCG ACCTGGCGGG CAACGCCTGG GTCGCTACCG ATGGCGCCGC CAGCGCCATT
AAACTGAACG ACGGCCTGTT TGCCATCCCG GTTGCCGGTT CGGAGCGCGG GCATGTGCAG
CAGTTCTTCT CGTCGGTGGC GGGCAGCGAG GTGTGCGGTC CGGAGTTTAC CCCCGATAAC
CGGACGCTCT TCCTGGCGAT CCAGCATCCG GGTGAGGGCG GCACATTCGA TAAGCCGATC
AGCACCTGGC CCGACCGCCA GGGTCTGGCG CGTCCGAGTG TCATTACCAT TCAGGCGTTC
GATAACCGGC GTATCGGTCG CTAG
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| Protein sequence | MGGRDEQDKL IVRSVEGKGK EFERILEERL SRRDFLKAAA VTSGLVVAAT AMNADVAAAQ
TRPAPLPPKF GKVAPTTPEV DEIAVPDGYY AATLIRWGEP IFADAPEFDV WTQTKEKQEK
QFGYNCDYVG YFPLPSYTSN NSTRGLLVVN HEYTNPELMF PGYDVENPNP TRTQVDVELA
AHGVSVIEVA RGRDGRWNVV RNSPYNRRLT GYTPMTVSGP AADHEWMKTN ADPTGRNVLG
TLNNCAGGKT PWGTVLTAEE NFHQYFANLR AMPNSDYRKA IHNRYGMPSG ASERRWENFH
DRFDIAKEPN EGFRFGWIVE FDPYNPNSVP VKRTALGRFR HEAATIVIAP SGQVVAYSGD
DARGEYVYKF VSNGRYNPRN RAANFNLLDD GTLYVARFNA DGTGEWLPLK HGFGPLNEGN
GFMSQGDVLI KTRNAADALG ATKMDRPEDI ETNPVNKKVY IILTNNSQRG VGNGPPVDAA
NPRANNRAGH IIELTEEGNN HAATRFTWNI FILAGLPTDE STYFAGYDKS KVSPIGAPDN
IVFDLAGNAW VATDGAASAI KLNDGLFAIP VAGSERGHVQ QFFSSVAGSE VCGPEFTPDN
RTLFLAIQHP GEGGTFDKPI STWPDRQGLA RPSVITIQAF DNRRIGR
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