| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1988 |
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| Symbol | |
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| ID | 5539466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2552774 |
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| End bp | 2553898 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894123 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001432094 |
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| Protein GI | 156741965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.590311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0366847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA CATCTATCGT GCCGACGCTG TCGGATCACT GCTCCACCCC TCATCTTTCC
GTCGTCTGGC AGTCGCGCTG GGGCATCCCC ATCGGATACG CTGTCTCTTC CGAGGCGCTG
GCGCTCGCAC TGGCTGCGCG CGGCGTCGAG TTGTCGTACC GCCCGACGCC GTGGCATATG
CCGGGAACAA TCCGCTACCC GGCGCTGCTG GCTGCCGCAG CGCGCGCGCC GCGCGACGAC
GTGCCGCAGG TCAGCTACGA CCAGGCAGAC CTGTTCTACA CCCGTCACGC GGGGTACAAA
ATCGGTTACA CCATGCTGGA AGTCGATGGA CTGCCGCGTG AGTGGGTCGC GGCGTGCAAT
GCCATGGACG AGGTCTGGAC GCCAAGCCGC TGGGGTGCGA CGGTCTTTGC CAATGCCGGA
GTGACGCGCC CGATCTATGT CATGCCGCTG GGGTATGATC CGGTGTGTTT TCGACCGGAT
GGACCGGCGC GCCGGATTGC GGAACGCTTC ACGTTTCTCT CGGTCTTTGA GTGGGGCGAA
CGCAAAGCGC CGGACATCCT GCTGCGCGCC TATGCAGCGT CGTTCACGCG ACGCGATGAC
GTGGCGCTGC TGTTGCGGGT GAACAATTTT GACGCAGAGG TCGATGTTGC GCGACAGATC
GCCGCGCTGC GCCTTCCCGC CGATGCTCCG CCGATTGCCC TGCTCTACAA CCGTTACATC
AGCGACGAGA GCCTGGGAGC GCTCTACCGC AGCGCCGATT GTTTTGTGCT GCCGACGCGC
GGTGAAGGAT GGGGGCTGCC GATCCTCGAA GCGATGGCGT GTGGGTTGCC GGTGATTGCC
ACCGACTGGA GCGGGCAAAC CGAATTCTTC CACGGCGGAG TCGGGTACCC GGTGCGGGTG
CGGCGGCTGG TTGCCGCCGA CGCCAAATGC CCCTACTACC TGGGCTGGCG CTGGGCGGAG
CCGGACATCG AGCACCTGAT CGCGCTGATG CGCCATGTGT ACGAGCATCC CAACGAAGCG
CGGGTGGTTG GCGCGCGCGC GGCGCAAGAA GCGGCAACGC GCTGGACGTG GGCGCACGCA
GCGGAGCGGA TTCACAGGCG GTTAATGGAT GCGACTGATG GGTAA
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| Protein sequence | MSRTSIVPTL SDHCSTPHLS VVWQSRWGIP IGYAVSSEAL ALALAARGVE LSYRPTPWHM
PGTIRYPALL AAAARAPRDD VPQVSYDQAD LFYTRHAGYK IGYTMLEVDG LPREWVAACN
AMDEVWTPSR WGATVFANAG VTRPIYVMPL GYDPVCFRPD GPARRIAERF TFLSVFEWGE
RKAPDILLRA YAASFTRRDD VALLLRVNNF DAEVDVARQI AALRLPADAP PIALLYNRYI
SDESLGALYR SADCFVLPTR GEGWGLPILE AMACGLPVIA TDWSGQTEFF HGGVGYPVRV
RRLVAADAKC PYYLGWRWAE PDIEHLIALM RHVYEHPNEA RVVGARAAQE AATRWTWAHA
AERIHRRLMD ATDG
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