| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1985 |
|---|
| Symbol | |
|---|
| ID | 5539463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2543682 |
|---|
| End bp | 2543963 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640894120 |
|---|
| Product | CRISPR-associated Cas2 family protein |
|---|
| Protein accession | YP_001432091 |
|---|
| Protein GI | 156741962 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.503159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTACG TAATCGCTTA CGACATTCCG GACGACGCGC GACGCCTGAA ACTGGCGAAC
GTACTCGAAG GATTCGGGCA GCGCGTGCAG CGCAGCGTCT TCGAGTGCGA CCTGACCGAG
CGCGAATACC GCGCACTGAT AAAAAAAGTC GAGCGCGTCG TTAACCTAAA CGAAGGGGAC
AGCGTGCGCA TCTACCGATT GTGCGGCGCA TGCGTAGCGA ACGTCGACGT CAGAGGAGAA
GGACCGCCGG TGGAAAAGAG CGTTGACATC TATATCGTCT GA
|
|---|
| Protein sequence | MLYVIAYDIP DDARRLKLAN VLEGFGQRVQ RSVFECDLTE REYRALIKKV ERVVNLNEGD
SVRIYRLCGA CVANVDVRGE GPPVEKSVDI YIV
|
|---|
| |