| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1970 |
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| Symbol | |
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| ID | 5539448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2521295 |
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| End bp | 2522137 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894105 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432076 |
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| Protein GI | 156741947 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2324] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.715339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGT CGCCTCTGTT TCAATGGCTT TCTCTAGCGT GTTTTTTCGC CTATTGTGCC
GTCTTTCCCG GTTCAACCAT CACTGTTGCG CTCAACGCCG TGCCGGCCTG GGGCCTCTGG
ATGGGCGCTG CCATGCTGAT CGTTCAGGGT CTGGCGGTGA TCTTCTGGGG ATTGGGCATG
TACGGCGCGC GCGGCGGTCT TGCGGTTGGT CTGGCAGCAG TGCTGGCATG GGCGGTTGAG
CATATCGGCG AAACAACCGG ATGGCCGTTT GGTCGCTATC AGTATACCGA AATGTTGCAG
CCGCAGATAC TGGGGATCGT GCCGGTTCCG ATCACGCTCG CCTGGTTGAT GGCTGGCTTT
GGATCGTGGC AACTGGCGCG CCTGGCGCTT GGCGGGCGCG GCGGGCGCAT CGGGCTTGCG
ACGCTTACCG GCGTGTTGAT TGTTGTGCTC GATCTTCAGA TCGAAACGGT CGCTACATTC
ATCAATGCAT ACTGGACCTG GATCGATACT GGTCCATACT ATCAAGTGCC TCCGCAGAAT
TTTGTCGGCT GGTGGATCGT TGGGTTCCTT ATGGCGCTGA TTATGACGTT TCTCCTGCCG
CCTGATGCGG GCGTCGAGCC TGCCGACGCA TCATCGACGC CGAAGCCATC GTTGTGGGCG
CGCACACTGC CATTCGTCTG GCATCGCGTT CCTGCTCTGC TCTATATGCT GAGCAGCATC
TTCTTCACTG CTGCGAATCT GGCGCGTGGC TATCCGCTGG CAGGTCTGGT CGGCGTGATC
TTCCTGGCAG TCGCTGGATG GATTGGCGCC ACACAGCGAC GACATCAGCC CAGAAACGGC
TGA
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| Protein sequence | MSPSPLFQWL SLACFFAYCA VFPGSTITVA LNAVPAWGLW MGAAMLIVQG LAVIFWGLGM
YGARGGLAVG LAAVLAWAVE HIGETTGWPF GRYQYTEMLQ PQILGIVPVP ITLAWLMAGF
GSWQLARLAL GGRGGRIGLA TLTGVLIVVL DLQIETVATF INAYWTWIDT GPYYQVPPQN
FVGWWIVGFL MALIMTFLLP PDAGVEPADA SSTPKPSLWA RTLPFVWHRV PALLYMLSSI
FFTAANLARG YPLAGLVGVI FLAVAGWIGA TQRRHQPRNG
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