| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1969 |
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| Symbol | |
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| ID | 5539447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2519824 |
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| End bp | 2521212 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894104 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432075 |
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| Protein GI | 156741946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0306284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGACGC TGCCCCTCTT CAACGACGAA GCGATCTATC TGTACCGCGC CCAGCAATTC
CCTGCCCAAC TCGAGTTCAC CGTCCATGAC GGCAAACTGA TCCACGAACT GCTCCTTGCC
GCACTTGCCC GCCTACCCTG GGATCCATTG CTCACCGGCA GAATCCTGTC GGTGCTGTGT
GGATGGCTTA CCGTTGTCGG GCTATGGCTC AGCGGAAGGA TCATTGGTGA TCGCACGGCG
GGTCTGTTCG CCGGATTGCT GTACATTCTC TCACCGCTAG CAATCATCCA CGACCGCCTG
GCTATTCCCG ACGCCATGCT GGGGAGTATA GCAGGCTTCC TGCTGGCGGC AAGCCTTCGT
CTGACTCTTC TGCCGCAACC CAACCGCTGG CACGCAGCCG GGGTCGGCGC GCTCGGCGCC
CTCGCCACGC TGGTCAAACT GCCAGGACTG TTCCTCTTCG CCCTCCCCGC GCTGATCATT
GTGACCAGCG CGGCAACGCC GGAGCGCCGA CATCAACAAT GGGCGCTGCT GCGCACAGTC
CTGATCATGA CCCTGCTGGC GCCCGCTTCA TTCGCGCCCT TCAACTATGG CGGAGCTGAA
AACCATAAAG TCGGCGTTTT CAATCTGGCA CTCCAGATCG AGCGCCTGAC AGACAATGTC
CGCCAGATTG GCGAATGGCT GGCGCTCACC CTGCCGCTGC CGACTCTCGC ACTCATCGGA
TTGGGACTGA GCCAGCGCCC GACACGCCGC TTGATTCTGA CCCTCGTCGC AGCTGCCTGC
GTCTTCTGTA TGGCGCTTGC CACGATTGGG AGCGTGCTCT ATCCTCGCTA CATCCTCCCT
GCGTGGCCTC TGCTGCTCGT TGTCGCCGGC GTGGGACTGA GCCGCCTGTG CCATCTTCCT
GTTGCGCTGC GTGGCGCTGG CATAGCGATA GCGCTTATCA ACGCGATATG GGGATCATTC
TTCGCCATTC AATATGCCCA AAACCCGGCA CAGGCGCCGT TGACCACGGC TGATCGTCAC
CAGTACATCG AGACATGGAC GGCGGGATAT CATCTCGATG AAATCACGCT TCTCTTGCAC
ACTGAAGCCG AACAAAAAGG CGACATTGCG CTGTTAAGTC CGTTGCAACC GCGACTGATT
CATATTGGTC CCAAGGTGTA TCTCAATGGC GATCCCCGCA TTTCCTTTGT CGATGTCGAT
GTTGCGAGCG ATAATGCCAG ACAGTTGATC AATGAGATCA CCACGCAACG AACGGTTTAC
GTTACACTCG ATGCCGAAGA AGTCGTCGCC TTCGACATCG AACGGCGCTT CCCTGAACTG
AAGATTATTC GCGAGTGGCG CAATCCCCAC AGCGACATGG CGTTTTATCT GTATGTCTGG
TCGCCGTGA
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| Protein sequence | MLTLPLFNDE AIYLYRAQQF PAQLEFTVHD GKLIHELLLA ALARLPWDPL LTGRILSVLC
GWLTVVGLWL SGRIIGDRTA GLFAGLLYIL SPLAIIHDRL AIPDAMLGSI AGFLLAASLR
LTLLPQPNRW HAAGVGALGA LATLVKLPGL FLFALPALII VTSAATPERR HQQWALLRTV
LIMTLLAPAS FAPFNYGGAE NHKVGVFNLA LQIERLTDNV RQIGEWLALT LPLPTLALIG
LGLSQRPTRR LILTLVAAAC VFCMALATIG SVLYPRYILP AWPLLLVVAG VGLSRLCHLP
VALRGAGIAI ALINAIWGSF FAIQYAQNPA QAPLTTADRH QYIETWTAGY HLDEITLLLH
TEAEQKGDIA LLSPLQPRLI HIGPKVYLNG DPRISFVDVD VASDNARQLI NEITTQRTVY
VTLDAEEVVA FDIERRFPEL KIIREWRNPH SDMAFYLYVW SP
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