| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1968 |
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| Symbol | |
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| ID | 5539446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2518158 |
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| End bp | 2519744 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894103 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001432074 |
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| Protein GI | 156741945 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.302268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGT ATTTTGCTCA TTCCGCTATC GATCCCGTCG ATCTTGAAGT GTTTCGCAAC
CGGTGCGCGG CAATTGCCGA AGAGATGGGC GCGGCGCTTG GGCGGAGCGC GCTTTCGGCG
AATATCAAGG AGCGACGCGA TTTCTCCTGT GCGGTCTTCG ATGCACAGGG GCGGATGGTT
GCGCAGGCGG CGCATATCCC GGTGCATCTG GGCGCTATGC CGCGTTCAGT CGAGGCGGCG
CTGGCGCAGT TCACCCTTGC GCCGGGTGAT GTCGTTATTC TCAATGATCC GTACCTTGGC
GGCACCCATC TCCCCGACTT GACCACTGTC GCTCCAGTGT ATGCCGGTGC GACGCTGATC
GGCTATACGG CAACGCGTGC CCATCACGCC GATGTTGGCG GTATGACCCC CGGTTCGATG
CCGATGAGTC GTGAGGTCTA TCAGGAAGGA TTGATCATCC CGCCAACCCT TCTCGCGCGC
GGCGGCATCC CCGATGAGGC GGTGATCGCG TTGATTTGCC GTAATTCACG TACCCCCGAT
GAGCGGCGCG GCGATCTGGC TGCCCAGATG GCCTGCCATC GCGTCGGTGC GCAACGTCTG
GCGGAACTGG CAGAACGGCA TGGTCCGGCA TGGGTGGCGC GCCATATGGA GGCGCTCCTG
GCGTATGGCG AACGCCATAT GCGCGCAGTG ATCGCCGCGA TCCCAGACGG AACATATACA
TTTGAGGACG CGCTGGATAA CGATGGTGTT GATGCCGATC CGCTGACGAT CTGTGTGCGC
ATCGACATCC ATGGCGAATG CGCTGTCGTA GACTTTGAAG GCACATCGTC ACAGTGCCGT
GGTCCACTCA ATGCGCCCCG CGCTGTGACC GAATCGGCGG TTCTCTACTG TTTTCGCTGT
CTCGGTTCGC CAGATATGCC GTCGTCGGCT GGCGCGTTCG CGCCACTCGA CATTCGTGTT
CCGGCGGGAA GCATACTGGC GCCTCACTCT CCGGCTGCGG TTGCGGGTGG GAATGTCGAA
ACGGCGCAGC GAGTCGTTGA TGTGGTGTTT GGTGCGCTGG CGCAGGCGCT CCCCGACCGA
ATTCCCGCGG CGTCGGCAGG TACGATGAAT AACTGGACAT TTGGCGGCAT GGCGTCCAAT
GGTGTGCCCT TTGCCTACTA TGAAACGCTT GGCGGCGGGA TGGGCGCCCG CCCGACGCTG
CCGGGTCTCA GCGGGGTGCA GGTGCATATG ACCAATACGC TCAATACGCC GGTCGAGGCG
CTGGAGCGTC AGTTTCCGTT GATTGTGCGG CGCTACGGGT TACGCCGCGG CTCTGGCGGC
GTGGGGCGCG TGCGCGGTGG CGATGGTCTG GTGCGCGAGG TTGAGTTTCG AGCGCCGGTC
ACGGTCAGCC TGTTGACCGA ACGCCGGGTG TATGCGCCCT ACGGATTGTA CGGCGGCGCT
CCTGGATTGC GCGGGCGCAA TATTCTGCTG CGCGATGGCG AAGAACGCAT CCTGCCCGGC
AAGATTACTA TCGACTTGCG TCCCGGCGAC ATTCTGCGCA TCGAAACGCC TGGCGGCGGC
GGCTTCGGCG CTCAGGAGCA GGGATAG
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| Protein sequence | MSSYFAHSAI DPVDLEVFRN RCAAIAEEMG AALGRSALSA NIKERRDFSC AVFDAQGRMV
AQAAHIPVHL GAMPRSVEAA LAQFTLAPGD VVILNDPYLG GTHLPDLTTV APVYAGATLI
GYTATRAHHA DVGGMTPGSM PMSREVYQEG LIIPPTLLAR GGIPDEAVIA LICRNSRTPD
ERRGDLAAQM ACHRVGAQRL AELAERHGPA WVARHMEALL AYGERHMRAV IAAIPDGTYT
FEDALDNDGV DADPLTICVR IDIHGECAVV DFEGTSSQCR GPLNAPRAVT ESAVLYCFRC
LGSPDMPSSA GAFAPLDIRV PAGSILAPHS PAAVAGGNVE TAQRVVDVVF GALAQALPDR
IPAASAGTMN NWTFGGMASN GVPFAYYETL GGGMGARPTL PGLSGVQVHM TNTLNTPVEA
LERQFPLIVR RYGLRRGSGG VGRVRGGDGL VREVEFRAPV TVSLLTERRV YAPYGLYGGA
PGLRGRNILL RDGEERILPG KITIDLRPGD ILRIETPGGG GFGAQEQG
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