Gene Rcas_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1951 
SymbolgatA 
ID5539429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2500999 
End bp2502471 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content63% 
IMG OID640894087 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001432058 
Protein GI156741929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.735841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.759727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC TCTATCAGTT GACGGTTGCT CAGGCGCGCG AGATGCTGGC GCGCGGCGAG 
ATTTCCTCGT TGGAATTGAC CGACGCGCTG CTGACGCGGA TTGCCGCTGT GGAACCGAAG
GTGCGCGCGT TTCTTGTGGT TGATGCCGCT GGCGCGCGGG CACAGGCGCG CGCAGCCGAT
GCGCGTCGTG CGGCCGGCGA TGCGTCGCCG TTGCTCGGTA TTCCAATGGG TATCAAGGAT
GTGATTTCGA CGCAGGGGCT GCGCACGACC TGCGCCTCGA AAATGCTTGA GAACTATACA
CCGGTGTACG ATGCGACGGC GGTGGCGCGG TTGAAGGCAG CAGGTGCGGT GATCCTCGGC
AAACTCAATT GTGATGAGTT CGCCATGGGG TCCTCGACCG AGAACAGCGC CTTTCAGCAG
ACGCGCAATC CCTGGAACCT TGAACGGGTT CCAGGCGGTT CATCCGGCGG TTCAGCAGCA
GCCGTCGCTG CCGGCGAGGC GCCGGCTGCC CTTGGCACCG ATACTGGCGG CTCGATCCGC
CAACCGGCGG CGCTCTGCGG CATTACCGGT CTCAAGCCGA CCTATGGGCG CGTGTCGCGC
TACGGACTGG TGGCGTTTGC CTCGTCACTC GATCAGATCG GTCCGATGGC GCGCACGGTG
CGCGATTGTG CGATTGTGCT CCGGGTTATC GCCGGGGCGG ATCCGTTCGA CGCTACCTGC
ACCGATTATC CGGCGCCGGA TTACGAAGCG GCGTTGACGG GTGATATTCG TGGGTTGCGC
ATTGGCGTTC CGCGCGAGTA CTTCGTCGCC GGTATGCAAC CCGACGTCGA GGCGGCGGTG
CGCACTGCCA TCGAGGTTCT GCGCGAACAG GGCGCGGAGG TGTGTGAGAT TAGCCTGCCA
CATACCCCAT ATGCGCTGCC AGTTTACTAC CTGATCGCTC CCGCCGAAGC CAGCGCCAAC
CTGGCGCGTT TCGATGGCGT GCGCTATGGG TTGCGCGTTC CAGGCGAAAG TTACTTCGAT
GAACTCGAAC GCACCCGCGG CGCCGGGTTC GGTCCAGAAG TTCGCCGCCG CATTATGCTG
GGAACGTATG CGCTCTCGGC AGGGTACTAC GATGCCTATT ATAAACGCGC CCAACAGGTG
CGTACCCTCA TTCGCCGCGA TTACCAGCAG GCGTTCGAGC AGGTCGATGT TATCGCGGCG
CCGACGACGC CGACCGTTGC GTTTAAGATC GGTGCGCACA CCGATGATCC CCTGGCGATG
TATCTGGAGG ATGTCTGCAC CCTGCCGCTG AATCTGGCAG GATTGCCGGG TCTTGTGGTT
CCGTGCGGGT TTGCCGAAGG ATTGCCGATT GGGCTGCAAC TGATCGGGCG GGCATTCGAT
GAAGAGTCGC TCCTGCGCGT CGGCGATGCC TATCAGCGTG TGACCGACTG GCATACGCGG
ATGCCGGAAG TGCGCGAGGA CGGTTCCGCT TGA
 
Protein sequence
MTPLYQLTVA QAREMLARGE ISSLELTDAL LTRIAAVEPK VRAFLVVDAA GARAQARAAD 
ARRAAGDASP LLGIPMGIKD VISTQGLRTT CASKMLENYT PVYDATAVAR LKAAGAVILG
KLNCDEFAMG SSTENSAFQQ TRNPWNLERV PGGSSGGSAA AVAAGEAPAA LGTDTGGSIR
QPAALCGITG LKPTYGRVSR YGLVAFASSL DQIGPMARTV RDCAIVLRVI AGADPFDATC
TDYPAPDYEA ALTGDIRGLR IGVPREYFVA GMQPDVEAAV RTAIEVLREQ GAEVCEISLP
HTPYALPVYY LIAPAEASAN LARFDGVRYG LRVPGESYFD ELERTRGAGF GPEVRRRIML
GTYALSAGYY DAYYKRAQQV RTLIRRDYQQ AFEQVDVIAA PTTPTVAFKI GAHTDDPLAM
YLEDVCTLPL NLAGLPGLVV PCGFAEGLPI GLQLIGRAFD EESLLRVGDA YQRVTDWHTR
MPEVREDGSA