| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1942 |
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| Symbol | |
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| ID | 5539420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2487912 |
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| End bp | 2489144 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894078 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001432049 |
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| Protein GI | 156741920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000293265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATTC TCATGCTCAC CTCGTCGTAC CCAAAGTACG TTGGGGAGAC GACAGCGCCC
TTCGTTGAAG CGATAGCGGT CGGTCTGGCG CGACGGCGGC ACACGGTGCA TGTTGTTGCG
CCGTTTCACC CCGATGTGCG GCGCGCGCCG GTTGAGTACG GCGTGCGGTT GCACTTTTAC
CGCTATGCCC CACACCGCGT TCTCAATGTC TATGGCTATG CCGAGTCGTT GCATGCCGAC
GTTGGTCTGC GCCGCACGGC GCTGGCGGCG GTTCCGTTTG CGCTGGCAGC GTCGCTCCGG
GCGCTGCTGC ACCTGACGCG CCATCACCGG TTCGATGTGA TCCACGCGCA CTGGGTGCTG
CCAAATGGCG CACCGGCTAT GCTTGCCGCC CGGTTGCGCA ACCTGCCGCT GGTCGTCAGC
CTGCACGGGT CCGATGTCTA TCTGGCGTCC AGGGGATGGC CCCTCGCGCT GAGCGCCGTC
GCCGTCTTTC GCAGCGCGGG CGCTATCACC GCGTGCAGCA GTGATCTGTA TCAGCGCGCG
CTGCGCCTCG GCGCGCCGCC TGCGCACACA ACGGTCATTC CATACGGCGT TGATGCGCAC
GCCTTTCGCC CCGATCCGCG CGCTGGCATC CAGGTGCGCG CCGAATTGCA CCTGCCACCT
GATACGTTGC TTATTCTCGC CATGGGCAGA ATGGTCTACA AGAAAGGATT CACCTTCCTG
CTTGATGCGC TGCCGCACAT CCGCGCACTG CATCCGCGTG CGACCCTGGT GCTGGCGGGG
TACGGCGATC TCCTCGATGA ACTGAAGGAG CATGCCAGGA GGCTCGGTGT CGCAGATGCG
GTCATTTTTC CGGGGCAGCT TCCACGCGAC CGCGCGGCGC GCTACGTCGC CGCCGCCGAT
GTGTATGTCG TACCCTCGGT GCGTGATGAT GCCGGTAATG TTGATGGCCT GCCCAATACG
CTCCTCGAAG GTATGGGAGC GGCGCGCCCG ATTGTTGCGA CTCGCACGGC CGGCATTCCC
GATGTCATCG CCGATGGTGT GCATGGCCTG CTCGTCCCGG AACGCGACCC GGTGGCGCTG
GCTGATGCCA TCGTGCGTCT GCTGAGTGAT CGCAATCTTG CAGCGCGTCT TGGAGAAGCG
GCGCGCCGCC GGGTGCTGGA CGAACTCTCC TGGGATGTGA CGGCGGTGCG CTTCGAGGAG
GCGTACCGTC ATGCCGTTGA ATGTAAACTT TAG
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| Protein sequence | MNILMLTSSY PKYVGETTAP FVEAIAVGLA RRRHTVHVVA PFHPDVRRAP VEYGVRLHFY
RYAPHRVLNV YGYAESLHAD VGLRRTALAA VPFALAASLR ALLHLTRHHR FDVIHAHWVL
PNGAPAMLAA RLRNLPLVVS LHGSDVYLAS RGWPLALSAV AVFRSAGAIT ACSSDLYQRA
LRLGAPPAHT TVIPYGVDAH AFRPDPRAGI QVRAELHLPP DTLLILAMGR MVYKKGFTFL
LDALPHIRAL HPRATLVLAG YGDLLDELKE HARRLGVADA VIFPGQLPRD RAARYVAAAD
VYVVPSVRDD AGNVDGLPNT LLEGMGAARP IVATRTAGIP DVIADGVHGL LVPERDPVAL
ADAIVRLLSD RNLAARLGEA ARRRVLDELS WDVTAVRFEE AYRHAVECKL
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