| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1941 |
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| Symbol | |
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| ID | 5539419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2484902 |
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| End bp | 2487766 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894077 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432048 |
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| Protein GI | 156741919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000218078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGGAGTA AGACGATTTC AGGCGATCCG CCTGCACTAC AGCCAACCGT CAGCGCGTAT
GCGCGCCTGA CGCTGCGTTA TCGTGATGCG CGTCTGGCGC TGGTTGTTGT GCTGGCGCTT
CTGGTGGGCA TCTTTGCGTA TCAGGCGCCG GTTGATGCGA CGATCTTCGT CGGTTGGCCC
GGCGACCGCC TGTTTTTGCA GGCAAGCGAG GGCGCTGGCG CTGCCGACCG GTTCACCTTC
TACGGCGATG AAATCACCGC TGACGCGCCG GGGGGGCGCA GCCGCTGGAC GCACCAGGGA
GCGCGGATTG ATCTGGCAGG TCTGGGCAAG GGTGCGCTTG TGGTGACGGT GCGCGCGCAG
GGGTGGCCCC CCGATGCCCT CAACCGCGCG ACGCGCCAGC CGGAGGTGAC GGTCATAGCG
GACGATACGT TCATTGGACG CTTCACGCCA GGCGAACAGT GGGCAGAGTA CGATGTCGCT
GTTCCCGCCG AGGTGCGGCG CAGCAATGAC CTGACGCTGA TGCTGGTTGC GTCGGATGTC
TTCACCAGCA CGAGCATCTA CAACGATCCT CGTCCAAAAG GAATCCGCAT CGACGCTATT
CGGGTGCGCA GCGTCGGTGA TGGTCCATTC GTGCCTGCGC TGGCGCCGGT GCTCTGGTTG
ACGGTGGGTG GAGGGGTCTG GTTTCTGGCG CTGGCAGGGG GCACTCGCAA GCCAACGTTT
GCCTTCGTTG CTGCGACGCT GCTCGTCAGC GGTGCAGCGC TTGCGCTGGC GGCGGCGCGC
ATCTGGACGG TTGTACTGTT GCCATGGCTC GCCGGGGCCG GCATTGCGCT GCTGATCTGG
CAGCATCGCG TCGCTCTGGT GCGCCATCCG CTGCGCCTGG CGCGCCGCTT CACGCGCGGG
TCGGCGCTCG GCTATGGGCT GCTGGCGGCA ACAGGCGCGT GGCTGGTGGC GATGATCATT
CAGTATGCCC CGCCGATGCC GCGCCTGGAA CAGTTCTGGG AGTTTTTTCC CGACTCGCTC
ATCTATACGC TGATCACGCT GGGCAGTCTG GCGCTGATCC TGGTCTACGG GCGCAATGGA
GTGCCCCGCC TGGCGCAGGC GACGGTGCGC ATGGCAGGTT CGCGGCGCGG TGCGACGCTG
ACGCTGACGC TCCTGCTGGC AGTGTGGGTT GGCTATCTGG GGGCGGTCAT TCTGGCGATG
CCATATGTCG GGCATGCCGA CTATGCCGAT AATGCGGTCG TGGCGCGCAA TCTCCTTGCC
GGACGAGGAT GGACGGTCGA TTATGTGACG CAGTTCTACC GCCTCTACGA CGGTGTCACG
CGCCCGCAGG AAACATGGCC CCTGCTGCAA CCGGTGTGGG TGGCGTCTTC GTTTGCGCTT
TTTGGCGTCA GTAATTGGGC TGCGAAGATT CCGAACCTGC TGTTTCTCAC TGTGCTGGCG
CTGGCGGTCT ATCAGGCTGG CGCGCGCCTG TGGGACCGGC GCGTCGGATT GGTTGCAGTC
GTGTTGCTCA TCACCAGTCA TCTCTACTTC AAACTGGTAA TCTATGTGAC GAATGACCTG
GGGTTTGCGC TGTTTGCGTT CGGCGCACTG CTGCTGCTGT ATCGCGCCTG GGGTGCGCCG
GATGCGATGG CGCTCGCGTC GCGTTTGCGC TTTGGGAGCA TATCGCAGCA ATTGGCGTTG
ACGATCCTCT CTGGTGCGTT AACCGGTCTG ATGCTCTTGC AAAAGCCGGG AAGCGGCGGG
TTGATCGCGC TGGGCATGGG ATGGTGGTTC CTGCGGGTGC GCTTTGACAC CTGGCCGCGA
ACCCTGGCCG ATCTGCGCAC GCGACTGGCG CCCGTAGCGG CGTGGGGTGT GGTTGCGTTT
GTGTTGCTGG CGCCGTATCT GGCGCGGAAT ATGCTCACCT TCGGCGTGCC GTTCTATTCG
ACCGAGGGCA AGGATGCGTG GGTGCTGGAG TACACGACAT GGGATCAGAT CTATGCCGTG
TATACCACCG AGGAAGGGTT CAGTACGCTC GGCGTTCCCG ACCGCAGCTG GATTCTGCGG
TGGGGATTCG ACCGCACCCT GGTCAAAATG GAGCGACAGG TGCGCGCACT GCGCGACTAT
CTGCTACCAT CCTGGCAGCA TGCCCCTTTC GGATTGAGCG AGTGGTTCGG GCGCGCCGAC
AAGGATCGCC TGCTGTTTGA TCCAGGCGCG TGGCTGGCGC TCTTCGGCGC TATGGCTGTC
ATAGCATCAC ATCGCCGCCT GATGACCCTG CTCGGCGCAG CGTTTGTGCC ATACACGCTG
TTTCTGATCG TCTACTGGCA CACGAATGAA GAACGTTACT GGGTTGTGGT GATGCCGTGG
CTTGCGCTTT TCGCTTCGGC AACGCTGTGG TGCATCTATG ACCGGATCGC TGCGCTGTCC
GATGGTCGTT GGACGCCATT CGGGTTGCTG GCAGTCGTTG CACTGATAGC GGCGATCATC
GCGCCGTCCT GGTCTCCAAT CGCCGAAAAG GTGCGCGACG AACCGAACCT GTATCGCGCC
GATCTCGACG CCTATGACTG GCTGAAGCGC AACACGCCGT CTGATGCCGT AGTGATGACG
CGCAACCCGT GGCAACTCAA CTGGCACAGC GAACGTCCGG CGCTCATGAT ACCGTACACG
ACCGACCGGG AGACCTTCCT GCGCCTGGCG CGCCGCTACA ATGTGCGCTA TCTGATGATC
GATACCTTGC AGCGCCCTGA GCCGGAAGTG CGCCGCCTGC TCGATGCCAT GATCGCCGAT
CCGGCATTGG GGTTCCGCGA AGTCTACCGC ACACCAGTGT ATCGCGCCGA TTTTCGCGGC
GTAACGAAGG AGATGATCGC CGTTGTGTAC GCATTCCCGC AGTGA
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| Protein sequence | MRSKTISGDP PALQPTVSAY ARLTLRYRDA RLALVVVLAL LVGIFAYQAP VDATIFVGWP
GDRLFLQASE GAGAADRFTF YGDEITADAP GGRSRWTHQG ARIDLAGLGK GALVVTVRAQ
GWPPDALNRA TRQPEVTVIA DDTFIGRFTP GEQWAEYDVA VPAEVRRSND LTLMLVASDV
FTSTSIYNDP RPKGIRIDAI RVRSVGDGPF VPALAPVLWL TVGGGVWFLA LAGGTRKPTF
AFVAATLLVS GAALALAAAR IWTVVLLPWL AGAGIALLIW QHRVALVRHP LRLARRFTRG
SALGYGLLAA TGAWLVAMII QYAPPMPRLE QFWEFFPDSL IYTLITLGSL ALILVYGRNG
VPRLAQATVR MAGSRRGATL TLTLLLAVWV GYLGAVILAM PYVGHADYAD NAVVARNLLA
GRGWTVDYVT QFYRLYDGVT RPQETWPLLQ PVWVASSFAL FGVSNWAAKI PNLLFLTVLA
LAVYQAGARL WDRRVGLVAV VLLITSHLYF KLVIYVTNDL GFALFAFGAL LLLYRAWGAP
DAMALASRLR FGSISQQLAL TILSGALTGL MLLQKPGSGG LIALGMGWWF LRVRFDTWPR
TLADLRTRLA PVAAWGVVAF VLLAPYLARN MLTFGVPFYS TEGKDAWVLE YTTWDQIYAV
YTTEEGFSTL GVPDRSWILR WGFDRTLVKM ERQVRALRDY LLPSWQHAPF GLSEWFGRAD
KDRLLFDPGA WLALFGAMAV IASHRRLMTL LGAAFVPYTL FLIVYWHTNE ERYWVVVMPW
LALFASATLW CIYDRIAALS DGRWTPFGLL AVVALIAAII APSWSPIAEK VRDEPNLYRA
DLDAYDWLKR NTPSDAVVMT RNPWQLNWHS ERPALMIPYT TDRETFLRLA RRYNVRYLMI
DTLQRPEPEV RRLLDAMIAD PALGFREVYR TPVYRADFRG VTKEMIAVVY AFPQ
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