Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1939 |
Symbol | |
ID | 5539417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2482983 |
End bp | 2484110 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640894075 |
Product | DNA methylase N-4/N-6 domain-containing protein |
Protein accession | YP_001432046 |
Protein GI | 156741917 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1041] Predicted DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000888828 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000001156 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAGC GCATGCTCCA AAATCTTCCC CTGTTCGAAG ATGACTATTT CGGATCACCA GATGAGATGC TCCACCTGAA CGAAGCGATT CTGGTAGATA TTATCCAAAA ATGTCAATCT ATCAACTCAA TGCTCAGTTT ACGCCATGCT ATTACAGAAA TTAAGCGTCG CATCTGTGAT CCTAACGACG AGTTACGAAA TAATAGCGAT GGCACACGAA CTGCTGATTT CAGCAAAAAC TACCTAATTT CCGAACTTGA CCAAATATCT GACTCTCTAA CAATTGATCG AGCACAATAC TATGTTGAAC GTTTACTTAA GAGCATTCTC GAGGTAAAAA CGGTTTCCAT TAACGACATA AACCTCAATC GGTGGAAAGA GTACGATGAT ATATATACTG ATAGTTTGTG GCTTATTGAT CGGCGTGATA GTTCTGGAGT TCACACAGCA GGTTATTGGG GTAACTTCGT CCCCCAAATC CCCTATCAGA TGATGCGTCG CTATACTAAG AAGGGTGATT GGGTCTTAGA CACCTTCGCA GGATCAGGAA CGACGCTCAT TGAAGGACAG CGATTAGGAA GGAACACCAT CGGTGTCGAA TTACAACCTC AAATGGTTGA ACATGCGCGT CGTCTTATTT CATCTGAACC CAATAGATAC AATGTTGTTA TTGATGTTAT CAATGATGAT AGTATGAATA TCGATTACGG TGCGGTATTA CAAAAATACG GAGCGAAGTC CGTACAACTG GTTATTATGC ACCCACCTTA TTTCGATATC ATTAAATTTA GTCATGACCC ACGCGATCTT TCGAATGCGC CATCAGTTGA AAGGTTCTTG GAGATGATGG GAACACTTGT TGACAGGATC AATCCAATAC TCGACAAGGA ACGATATCTC GTGCTAGTCA TAGGTGATAA ATACGTAAAG GGTGAATGGA TACCTCTTGG CTTCCAAACC ATGAGTGAAG TCATGAAGCG CGGTTTTTCG CTCAAAAGTA TCATTATCAA GAACTTCGAG GATACATCCG CAAAACGCAA TCAAAAAGAG TTATGGCGCT ATCGCGCACT TGCTGGAGGT TTCTATATAT TTAAACACGA ATATATCTTC CTCTTCAAAA AACGGTGA
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Protein sequence | MSERMLQNLP LFEDDYFGSP DEMLHLNEAI LVDIIQKCQS INSMLSLRHA ITEIKRRICD PNDELRNNSD GTRTADFSKN YLISELDQIS DSLTIDRAQY YVERLLKSIL EVKTVSINDI NLNRWKEYDD IYTDSLWLID RRDSSGVHTA GYWGNFVPQI PYQMMRRYTK KGDWVLDTFA GSGTTLIEGQ RLGRNTIGVE LQPQMVEHAR RLISSEPNRY NVVIDVINDD SMNIDYGAVL QKYGAKSVQL VIMHPPYFDI IKFSHDPRDL SNAPSVERFL EMMGTLVDRI NPILDKERYL VLVIGDKYVK GEWIPLGFQT MSEVMKRGFS LKSIIIKNFE DTSAKRNQKE LWRYRALAGG FYIFKHEYIF LFKKR
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