| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1934 |
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| Symbol | |
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| ID | 5539412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2475938 |
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| End bp | 2478013 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894070 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_001432041 |
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| Protein GI | 156741912 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.230248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000161131 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAGCC ATGCGCATAT GTACGATATT CTCTTTGAGC CGGTGCGGAT TGGACCGGTG
ACCGCGCCAA ATCGTTTTTA CCAGGTTCCG CATTGCAACG GCATGGGGTA CCGCATGCCG
CGCGCGCTGG CTGAAATGCG CCGCGTCAAA GCCGAAGGCG GCTGGGGCGT TGTCTGCACA
GAAGAAGTCG AGATCCATCA TTCCAGTGAT CTGGCGCCGT TCTTCGAGGG GCGGCTGTGG
AGCGACGATG ACATTCCGGC GCTGGCGCTG ATGGCGGAAG CCGTGCATCG TCACGGCGCG
CTGGCGGGGA TCGAACTGAC CCACAATGGC CACGATGCGC TTAACTATTA CTCCCGCGCC
ACATCGTTCG GTCCACGCTC GATGGGCTTG ATGGGGGGCA CAGGCTTCGA GCCGGGGCAG
TGCCGCCGGA TGGACCGCGA GGATATTCGG AATCTGCGCC GCTGGCACCG GAATGCCGCA
CTGCGCGCGA AACGCGCCGG CTTCGACATT ATCTACTGTT ACGCCGGGCA TGGCTTGAGC
CTGGCGATGC ACTTCCTGCT GCGCCGCTTC AACGACCGCA CCGACGAGTA TGGCGGCAGC
CTGACCAACC GTGTACGCCT TTTCCGCGAT TTAATCGAGG ACACAAAGGA CGCCGTCGGC
GACCGCTGCG CAGTGGCGGT GCGGATGGCG GTTGATGAAC TGCTCGGTGA TGAAGGTCTC
AGCAGTCAGG GGGAGGCGTA TGAGATCGTT GCCATGCTCG CGGAACTCCC CGATCTGTGG
GATGTCAATA TCTCTGCGTG GAGCAACGAC TCGGCGTCGT CGCGCTTTGA GAAGGAAGGG
TTCCAGGAGC CGTACATTGC CTTCGTCAAA CAATTGACGA GCAAACCGGT GGTTGGCGTG
GGACGCTACA CCTCGCCGGA GGCGATGGTG TCGGCGGTGC GGCGCGGCAT TCTCGACTTC
ATCGGCGCAG CGCGTCCGTC GATTGCCGAT CCCTTCCTGC CGCGCAAAAT CCAGGAAGGA
CGCACCGAAG ATATTCGCGA GTGCATCGGA TGCAATATTT GCGTCTCCGG CGACAATAAG
TGTGTGCCGA TCCGCTGCAC CCAGAATCCA ACAATGGGCG AGGAATGGCG GCGCGGGTGG
CATCCTGAAA CGATTGCTCC AAAGTGCAGC GATGCAGAAG TCCTGGTCAT CGGGGCGGGT
CCTGCCGGAC TGGAGTGCGC CAGGGCGCTC GGTCAGCGCG GCTATCAGGT GGCGCTGGTC
GAGGCGCGGC GTGAACCGGG CGGGCGGGTG GCGCGTGAGG CGCGCCTTCC CGGTTTGAGC
GAATGGCGGC GTGTGATCGA CTGGCGCTTG ACGCAGATCG CCCGTATGCC GAACGTGCAA
TTGCTGCCGG GAAATCCGAT GACCGCCGCC GATGTGTTGG AAAGCGGGTA TGAGCACGTG
ATCATCGCAA CCGGTGCGAT CTGGCGGCGC GATGGCGTGG GACGCACGGT GTACCATCCC
GTTCCCGGCT GCGATCTGTT GCACGTCTAT ACACCCGATG ACATTATGGA CGGACGCCTG
CCGACAGGTC GCGTGGTAAT CTACGATGAC GATCACTATT ACATGGGCGG CGTGCTGGCG
GAATTGCTCG CGTGTCGGGG GTGTGGCGTC ACGCTCTGCA CGCCGGCGCC GCTGGTGTCG
CACTGGTCGC AGTTCACACT GGAACAGGAA CGCATCGAGC GTCGGTTGCG CGACCTTGGT
GTTGCCATCC ATACGCGCAG CGCCCTCAGC GCCGTTCACG TTGGCGCCGT CACGGTACGT
GACATTGCCG CGAGTCGTCT GACCGATCTG GCATGTGATT CGGTGGTGAT GGTCGCCGAT
CGCGCGCCGC GCGACGCACT GGCGACCGAC CTGGCGCCGG CGCGAGCCGA CGGTCGTCTC
CGTACTCTGC GGCTCATCGG CGATGCCAAC GCGCCGCACA TCATCGCGCA GGCGGTGTTT
GCCGGGCACC TGGCGGCGCG CGAGTTCGAT GAGATGCCGG ATGCCGATGT GCCGCCGTTT
GCACGAGAGT TTATTCCGTT GAACGTTCAA TCTTGA
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| Protein sequence | MTSHAHMYDI LFEPVRIGPV TAPNRFYQVP HCNGMGYRMP RALAEMRRVK AEGGWGVVCT
EEVEIHHSSD LAPFFEGRLW SDDDIPALAL MAEAVHRHGA LAGIELTHNG HDALNYYSRA
TSFGPRSMGL MGGTGFEPGQ CRRMDREDIR NLRRWHRNAA LRAKRAGFDI IYCYAGHGLS
LAMHFLLRRF NDRTDEYGGS LTNRVRLFRD LIEDTKDAVG DRCAVAVRMA VDELLGDEGL
SSQGEAYEIV AMLAELPDLW DVNISAWSND SASSRFEKEG FQEPYIAFVK QLTSKPVVGV
GRYTSPEAMV SAVRRGILDF IGAARPSIAD PFLPRKIQEG RTEDIRECIG CNICVSGDNK
CVPIRCTQNP TMGEEWRRGW HPETIAPKCS DAEVLVIGAG PAGLECARAL GQRGYQVALV
EARREPGGRV AREARLPGLS EWRRVIDWRL TQIARMPNVQ LLPGNPMTAA DVLESGYEHV
IIATGAIWRR DGVGRTVYHP VPGCDLLHVY TPDDIMDGRL PTGRVVIYDD DHYYMGGVLA
ELLACRGCGV TLCTPAPLVS HWSQFTLEQE RIERRLRDLG VAIHTRSALS AVHVGAVTVR
DIAASRLTDL ACDSVVMVAD RAPRDALATD LAPARADGRL RTLRLIGDAN APHIIAQAVF
AGHLAAREFD EMPDADVPPF AREFIPLNVQ S
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