| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1919 |
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| Symbol | |
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| ID | 5539397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2463095 |
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| End bp | 2463478 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894056 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001432027 |
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| Protein GI | 156741898 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000391131 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGATG TCCTTGATCT GGCGCGCGGC TGGTTGCGCA AAGGCGATAG CGATCTGGCT
GCTGCACGCC TGATCGCAAC GAGTAACGGT CCCTATGACA CGGCCTGTTT TCACGCGCAG
CAGGCAGCGG AAAAGTATCT CAAAGGATTG TTGGCGTTTG CCGGACAGCC AATTCCCTTC
ACGCATAACC TCGAAGAGTT AGCGCACCGT TGCAAAGCGC TCTACCCGAC GGTTGACTTT
ATGGAGGTCG AGCTGACGCA GTTGACCCCT TACGCCGTGC AGATGCGGTA TGATCCCGAC
TTCTGGCCCG ATTTGGCGAC CCTTCAGGAG GCGATTGCGC TCGCTGAACG GGTACGCATC
ATCGTTCTCT CGCTCGTCCG ATGA
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| Protein sequence | MSDVLDLARG WLRKGDSDLA AARLIATSNG PYDTACFHAQ QAAEKYLKGL LAFAGQPIPF
THNLEELAHR CKALYPTVDF MEVELTQLTP YAVQMRYDPD FWPDLATLQE AIALAERVRI
IVLSLVR
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