| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1902 |
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| Symbol | |
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| ID | 5539380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2447243 |
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| End bp | 2448679 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894039 |
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| Product | ammonium transporter |
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| Protein accession | YP_001432010 |
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| Protein GI | 156741881 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0388203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000364558 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCAGGC GACGAACAAA ACTCATGCTC GGCATTGGCG CGCTTGCCGG TCTGTTGATC
GGCACAACCG GCACCTCCTT TGCCCAGGAG ATCGACCCCG CGATTGCGGA AATGGGCGTG
GTCACCGACA CTATGTGGCT GCTTGTTGCG GCGTTCCTGG TGTTCTTCAT GCAGGCGGGC
TTCGCGCTTG TCGAGGCGGG TTCCACCCAG TCCAAGAACA TGATCAACAT CATGTTCAAG
AACTTGATGG ACTTCTGCGT GGCTGCACTG GCGTTCTGGA TGGTTGGCTG GGGGATCGCA
TATGGCGCCA GCGTTGGCGG TTTCTTTGGA TCTGATCAGT TCTTCCTGGG CGATGTGCGC
GAGGCAGGGA GTGTGCCGAC GCTCGCGGTC TGGCTGTTCC AGGTGGTGTT CGCCGGTACT
GCGGCGACGA TCGTCTCCGG TGCGATGGCG GAACGCACGA AGTTCAGCGC CTATCTGATC
TACAGCGTGG TTATCTCGGT GCTTATCTAC CCGGTGGTGG TGCACTGGGT ATGGAGCGGC
GCCGGCTGGC TCAACGATTA CGATCCGACA ACCACAGGCG ATTGGGGCTT TACCGATTTC
GCCGGTTCGA CCGTCGTTCA TAGCGTCGGC GGTTGGGCGG CGTTAATGGG CGCCTGGCTT
CTTGGTCCGC GCATGGGGCG CTATGGTCCC GATGGCAAAC CGCGTGAGAT TCCCGGTCAT
AGCGCGGCGC TTGCCGGTCT CGGCGTCTTC ATCCTCTGGC TTGGTTGGTA TGGTTTCAAC
CCCGGCAGCC AGCTGGCGTT CAAGTCGCAG GGCGATGCAG ACGCGATTGC GCTGGTCGCG
GTTACGACGA CACTGGCGGC GGCAGCCGGC GCTGTGGGCG CAATGATTGC CAGTTGGCTC
AAGAGCGGCA AGCCGGAACT CGGCGCGACG CTCAACGGTG TGCTCTCCGG TCTGGTGGCG
ATTACGGCAG GTTGTGCCTA CATGCGCCCG CTCGATGCGG TCATCGTTGG GCTGGTCGCC
GGTCCGCTCT ATGTGATCTC AATGAAGTGG ATGGAATCAC TCAAGATCGA TGATCCGGTC
GGCGCGGTGC CGGTCCACCT GGTGAATGGC GTCTGGGGCA CGCTGGCGGT CGGTCTGTTC
GCAACGATTG AAGGCAACAC CGGCACGGTC GGCTTGTTTG CCGGCGGCGG TCCGCAACTG
TTGATCGCTC AGATCGTCGG TGTGCTGGCA ATCGGCGCAT GGTGTGCGTT GACGAGTTTC
CTGCTCTTCT TTATCCTCAA GCGCACGATT GGGCTGCGTG TGTCGCCCGA AGAGGAGGAA
CTCGGTCTCG ACATCGGCGA GCACGGGACG GTCGCTTACC CGGATATTCA TAAGATGCCT
GAGCCGGAGA CGGTGCGCGC GATCACTGGC AAGCCGCTCT CCAGTGCGGC TGAGTGA
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| Protein sequence | MVRRRTKLML GIGALAGLLI GTTGTSFAQE IDPAIAEMGV VTDTMWLLVA AFLVFFMQAG
FALVEAGSTQ SKNMINIMFK NLMDFCVAAL AFWMVGWGIA YGASVGGFFG SDQFFLGDVR
EAGSVPTLAV WLFQVVFAGT AATIVSGAMA ERTKFSAYLI YSVVISVLIY PVVVHWVWSG
AGWLNDYDPT TTGDWGFTDF AGSTVVHSVG GWAALMGAWL LGPRMGRYGP DGKPREIPGH
SAALAGLGVF ILWLGWYGFN PGSQLAFKSQ GDADAIALVA VTTTLAAAAG AVGAMIASWL
KSGKPELGAT LNGVLSGLVA ITAGCAYMRP LDAVIVGLVA GPLYVISMKW MESLKIDDPV
GAVPVHLVNG VWGTLAVGLF ATIEGNTGTV GLFAGGGPQL LIAQIVGVLA IGAWCALTSF
LLFFILKRTI GLRVSPEEEE LGLDIGEHGT VAYPDIHKMP EPETVRAITG KPLSSAAE
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