| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1900 |
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| Symbol | |
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| ID | 5539378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2443794 |
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| End bp | 2444900 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894037 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001432008 |
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| Protein GI | 156741879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0133232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC CCACAACCAT TCGCTCTCTG ACCGTGACCC CCCTTGACAT CCCGCTCCAC
GAACCGTTCG GCATTGCCGG CGGCGCCCAG GAAATGGCGC ACAATCTGCT GATCACCGTC
GAGTTGACGG ACGGCACGCG CGGCTACGGC GAAGCAGCGC CGTTTCCGGC GTTCAACGGC
GAGACGCAGG AAACGGCGCG CGCGGCGATC CTGGCGGCGC AACCGATTGT CGAAGGCGCC
GACGCGCGCG AGTGGCGGCG GATTGCGCTG GCGCTCCCCG CTATTCCTGG CATGACCGGT
TCGGCGCGTT GCGCCATTGA GACTGCCCTG CTCGATGCGT TGACGCGCCG CGCGCGCCTG
CCGCTCTGGG CATTCTTCGG CGGCATGGCG ACGACCCTGG AAACGGATGT GACCGTCACC
ATCGGCAGCG TGGCGGCGGC GGCGCGCGCG GCGCAGGCGA TTGTCGCGCG CGGCGTCACC
ACGATCAAGA TCAAGATCGG CGCCGGCGAT CCAGAGACCA CCACGATCCG CACGATGGAA
CACGACCTGG CGCGGATTGT CGCTATCCGG GATGTCGCGC CGGATGCGCG CCTGATCCTC
GACGGCAACT GCGGCTATAC CGCCGATGAT GCGCTTCGAT TGCTCGATAT GCTGAGCGTT
CACGGCATTG TTCCGGTCCT GTTCGAGCAA CCGGTGGCGA AGGATGATGA AGCCGGATTG
CGTCGTCTGA CCGCCGCGCG CCGTGTGCCC ATCGCCGCCG ATGAAAGCGC ATCGAGCGCC
GCCGATGTTG CGCGGTTGGC GCAGTCCGGC GCCGTTGATG TGATCAACAT CAAATTGATG
AAATGTGGCA TTGTTGAAGC GCTCGACATC GCCGCGATTG CACGCGTTGC AGGCTTGCGC
CTGATGATCG GCGGAATGGT CGAGTCGTTT CTGGCAATGA CCGTCTCTGC CTGTTTTGCC
GCCGGTCAGG GCGGCTTCGC TTTCGTAGAC CTGGACACGC CCCTTTTTCT GGCAGAGAAC
CCCTTCGTCG GCGGTATGAC CTATCGTGGC GGCGTCATCG ATCTGGGGGC GATCCATGCC
GGGCACGGCG TCACGCTGCC TGCTTGA
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| Protein sequence | MTTPTTIRSL TVTPLDIPLH EPFGIAGGAQ EMAHNLLITV ELTDGTRGYG EAAPFPAFNG
ETQETARAAI LAAQPIVEGA DAREWRRIAL ALPAIPGMTG SARCAIETAL LDALTRRARL
PLWAFFGGMA TTLETDVTVT IGSVAAAARA AQAIVARGVT TIKIKIGAGD PETTTIRTME
HDLARIVAIR DVAPDARLIL DGNCGYTADD ALRLLDMLSV HGIVPVLFEQ PVAKDDEAGL
RRLTAARRVP IAADESASSA ADVARLAQSG AVDVINIKLM KCGIVEALDI AAIARVAGLR
LMIGGMVESF LAMTVSACFA AGQGGFAFVD LDTPLFLAEN PFVGGMTYRG GVIDLGAIHA
GHGVTLPA
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