Gene Rcas_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1899 
Symbol 
ID5539377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2441874 
End bp2442143 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content62% 
IMG OID640894036 
Producthypothetical protein 
Protein accessionYP_001432007 
Protein GI156741878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00459901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAACGG AGGTGCTGGT CGGCGACTCC TTCACGGATG CGGGAAACAA TCCTGTTGCC 
GACTACATCG CCGTTTGGGA TGGGACGGCG TGGAGCGGTC TGCTTAGCGG CGGCACGACT
GGACTCAACG GCGGAGTCCG CGCACTTGCG TTGCAGGGAT CTGACCTGCT GGCAGGTGGT
GACTTCTTCA ATGCAGGGGG CAACCCGCTC GCCGATTTTA TCGCGCGGTA TGGCCTCACT
CGGGTGTATT TGCCGCTGGT CACGCGGTAA
 
Protein sequence
MATEVLVGDS FTDAGNNPVA DYIAVWDGTA WSGLLSGGTT GLNGGVRALA LQGSDLLAGG 
DFFNAGGNPL ADFIARYGLT RVYLPLVTR