| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1893 |
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| Symbol | |
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| ID | 5539371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2434064 |
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| End bp | 2435245 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894030 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001432001 |
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| Protein GI | 156741872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.229898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0495469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTG AAGCAACGAC AGGCGCGGAG CTGGTCATTA CCCGTCGCTC CTTTCGCTCG
TTTGCGAGCG AAGTCTTCGG TCCTCTCCTT CAGGTGTTCC TGTTCGTCGT CGGCAGTGCC
GTTGTGCTGG GCGGCATCGT TATTCTGCTG GCGCTCGCGT TGCGCGGGGC GCGCACCGAT
ATCGATCTGC TCCAGGGGAC GATCACGATC CTGCCGCAGG TGATCGTCGA TGGACTGGTG
CGCGGGTTTC TCTATGCTAC CATTGCTCTT GGCTACACGA TGGTCTATGG CGTTCTCGAA
TTCATCAACT TCGCACACGG CGAGATTTTC ATGGTTGGCG CCTTCGTTGG CGCCTTTTTT
AGCGCTGCGC TGGCATCGTC GGGGATGTTG ACGACCCTCA GCCCGATTCT GTTTGTCATT
GCCGCTGTGC TGCTCGGCAT GGCCGTCTCT GGAGTTCTGG CGATGTCGAT CGAACGCGTC
GCGTACCGTC CGCTGCGTAA TGCGCCGCGC CTGGTGCCGC TCATTTCGGC AATCGGCGTC
TCGCTCGTGT TGCAGGACGT GATGCGCATG ATTGCGGTTA ACACCGGGCT GGGGTTCAAT
GCGCAGTTTC GCACGCCGGA CCTCGGTCAA CCACTGGTGT TGGCGCAAAT GCCGATCTCT
GACGAGCGCA CGATTCCGGT CAGCATCGAT AGTCGCTCGT TGATCTTTAT TGTGGTGGCG
ATACTGATGT TGATCGGGCT GAATTATCTG GTCAATATCA CCAAACTCGG CAAGGCGATC
CGCGCCGTGG CGCAGGATCG ACCGGCAGCC AGTCTGATGG GCATCGATGT GAACCGTGTG
ATTGCCATCA CGTTCCTCAT TGGTGGCGCG CTCGGCGGCG CAGCCGGGAT TCTGTTCGGT
ATGCGCGTCG GCACGATCAA TCCATACGTC GGGTTCTTGC CCGGTCTCAA AGCCTTCACT
GCGGCGGTGC TCGGCGGCAT CGGCAACATT ACCGGCGCGA TGGTCGGCGG GATTGTGCTT
GGCTTCCTGG AAGCGTTCGT TGCCTCGTAT CTCTCGCTCT TCACCCGCGG GCAGTTTTCG
GGTGCGAGTT ATGCCGATAT TGTGGCGTTC AGCATTTTGA TTCTGATCTT GATCTTCCGA
CCATCTGGCT TGCTGGGCGA AGTGGTGACG CAGAAGGTGT GA
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| Protein sequence | MAVEATTGAE LVITRRSFRS FASEVFGPLL QVFLFVVGSA VVLGGIVILL ALALRGARTD
IDLLQGTITI LPQVIVDGLV RGFLYATIAL GYTMVYGVLE FINFAHGEIF MVGAFVGAFF
SAALASSGML TTLSPILFVI AAVLLGMAVS GVLAMSIERV AYRPLRNAPR LVPLISAIGV
SLVLQDVMRM IAVNTGLGFN AQFRTPDLGQ PLVLAQMPIS DERTIPVSID SRSLIFIVVA
ILMLIGLNYL VNITKLGKAI RAVAQDRPAA SLMGIDVNRV IAITFLIGGA LGGAAGILFG
MRVGTINPYV GFLPGLKAFT AAVLGGIGNI TGAMVGGIVL GFLEAFVASY LSLFTRGQFS
GASYADIVAF SILILILIFR PSGLLGEVVT QKV
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