| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1889 |
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| Symbol | |
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| ID | 5539367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2428964 |
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| End bp | 2430058 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894026 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001431997 |
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| Protein GI | 156741868 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0991728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00579154 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTCGT TTACTCCATC GGAAGAACAG CAACTCATTA TCGACACGGT GCGACGCTAT
GCGGCCGATC GCATGCGCCC CGCCGCCTAC GAAGCCGATG AGAAGCGCAC CATTCCGCAG
GATATTATTG CCCGCGGGTG GGATCTCGGT CTGCTGCCAA GCGCTATTCC TGAGCAGTAC
GGCGGCTTTG GCGAGACGCA TCAGGCGCTC ACCGGCGCGC TGGCGGCGGA AGAACTCGGG
TATGGCGACC TTTCGATGGC GCTCTACCTG ATGACTCCCA ACCTGTTTGC CATCCCTATC
CTCCACTACG GCACTGAAGA ACAGAAGGAG AAATGGCTCC CTCGGCTCGT GGAAGGCGGA
TTTGCGCCCT ATACGGCGGC GCTGATCGAG CCGCGCTGGA GTTTCGACCC ACACGCGCTC
CATACCGTCG CCGAGCGCGA AGGGCATGTG TACGAGATCA CCGGGCACAA AGCGCTCGTG
CCGCTCGCCG CCGATGCGCA TGCATTTCTA GTCTACGCTC GCGAGGGAGA GACGACACAG
GCATTTATTA TCGAGCGCGG CACGGAAGGG CTGGCAGTGC TCGAGCGCGA AAGCTTCATG
GGCATCCGCG CACTGCCAAC CTACGAACTG CGGCTGGACG ATGTCCACGT GCCGGCATCG
TGCCGGGTTG GTGGCGATCA GGGCATCGAC ATCGACCATC TGATGAACTA TTCGCGGGTG
GCGCTGGCGG CGCTGGCGGT TGGCGTGGCA CGCGGCGCGT TCGAGTATGC GCGTGATTAT
GCCAAACAGC GCGAGGCCTT CGGCAAACCG ATCGCCCAGA ATCAAGCGAT TGCCTTTATG
CTGGCGGAAA TGGCGATTGA GGTCGAGGCG GCGCGCCTGA TGACGTATGA GGCTGCCTGG
CATCTTGATA AAGGGCGCCA TGCCGTGCAG CAGGCGGCGC TCGCCAAAGC ATACGCCGAC
GAAATGGCGC TGATGGTGAC CGACCGCGCC GTACAGATAC TCGGCGGACA CGGCTACATT
CGTGAACATC CGGTCGAACG CTGGCTGCGC AATGGGCGCG GGTTCAGCAC GTTCCTTGGG
CTTGCGATGG TGTGA
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| Protein sequence | MISFTPSEEQ QLIIDTVRRY AADRMRPAAY EADEKRTIPQ DIIARGWDLG LLPSAIPEQY
GGFGETHQAL TGALAAEELG YGDLSMALYL MTPNLFAIPI LHYGTEEQKE KWLPRLVEGG
FAPYTAALIE PRWSFDPHAL HTVAEREGHV YEITGHKALV PLAADAHAFL VYAREGETTQ
AFIIERGTEG LAVLERESFM GIRALPTYEL RLDDVHVPAS CRVGGDQGID IDHLMNYSRV
ALAALAVGVA RGAFEYARDY AKQREAFGKP IAQNQAIAFM LAEMAIEVEA ARLMTYEAAW
HLDKGRHAVQ QAALAKAYAD EMALMVTDRA VQILGGHGYI REHPVERWLR NGRGFSTFLG
LAMV
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