Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1885 |
Symbol | |
ID | 5539363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2421536 |
End bp | 2422603 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894022 |
Product | galactose-1-phosphate uridylyltransferase |
Protein accession | YP_001431993 |
Protein GI | 156741864 |
COG category | [C] Energy production and conversion |
COG ID | [COG1085] Galactose-1-phosphate uridylyltransferase |
TIGRFAM ID | [TIGR00209] galactose-1-phosphate uridylyltransferase, family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00396912 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTCTCGC TCACCGATCA TCCGCACCGA CGCTACAACC CGCTGACACG CGAGTGGGTG CTGGTTTCGC CGCACCGCAC CAAACGCCCC TGGCAGGGGC AGGTCGAACA ACCGCCGCCG GAACAGCGCC CGGCGTATGA TCCCAACTGC TACCTCTGTC CCGGAAACGC CAGAGCAAAT GGCGAAGTCA ACCCACCGTA TGAAAGCACG TTTGTGTTCA CCAACGATTT CTCGGCGCTG CTGCCGGATA TTCCGTCCGG TGAATATGCG TCGAGCGCCG GATCGCCGGA CGATGCCGCG CCGCCACTCC TTTACGCCCG CAGTGAGCGC GGCATCTGTC GGGTGGTATG CTTCTCGCCG CGCCACGATC TGACACTGGC GGAGATGGAC GTGCCAGACC TTGCGCGCGT GGTCGATGTG TGGGCGCAGG AGTATGAAGC AATCGGCGCG TTGCCCTTCA TCGGATATGT GCAGATCTTC GAGAATCGCG GCGCGATGAT GGGCGCGAGC AACCCGCATC CCCACGGGCA GATCTGGGCT ACCGAGCGCA TGCCATCGCT GATTGTGCGC GAAGACGCTG CCCAGTGCGA CCACCTGGCG GCGACCGGAC GTTCATTGCT GGCGGATTAC CTGGCGCTCG AACTCGAACG CGAAGAGCGC ATCGTCTGCG CCAATGACCA TTTCGTTGCG CTGGTTCCAT TCTGGGCAGT CTGGCCCTTC GAGACCATAA TCATCAGCCG CCGACACGTT GGCGCGCTCA GCGATTTGAC AGCAGACGAA CGCATGGGTC TGGCGGATGT GCTGAAACGC CTGACCACGC GCTACGATAA TCTTTTCCAG GTGTCGTTTC CCTATTCACT TGGGTTTCAC CAACGCCCTA CCGACGGCGC GCCCCACCCG GCATGGCATC TCCATGCGCA CGCCTACCCG CCGCTGCTGC GCTCGGCGAC GGTGCGAAAA TTCATGGTCG GCTTCGAGTT GCTTGCCGAA GCGCAACGTG ACATCACGCC CGAACAGGCG GCTGAGCGCC TGCGCGCGTT GCCGGAACGC CACTATCGAT CCGTGTAG
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Protein sequence | MFSLTDHPHR RYNPLTREWV LVSPHRTKRP WQGQVEQPPP EQRPAYDPNC YLCPGNARAN GEVNPPYEST FVFTNDFSAL LPDIPSGEYA SSAGSPDDAA PPLLYARSER GICRVVCFSP RHDLTLAEMD VPDLARVVDV WAQEYEAIGA LPFIGYVQIF ENRGAMMGAS NPHPHGQIWA TERMPSLIVR EDAAQCDHLA ATGRSLLADY LALELEREER IVCANDHFVA LVPFWAVWPF ETIIISRRHV GALSDLTADE RMGLADVLKR LTTRYDNLFQ VSFPYSLGFH QRPTDGAPHP AWHLHAHAYP PLLRSATVRK FMVGFELLAE AQRDITPEQA AERLRALPER HYRSV
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