| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1881 |
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| Symbol | |
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| ID | 5539359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2415371 |
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| End bp | 2416264 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894018 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001431989 |
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| Protein GI | 156741860 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.39074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTA CAACTCAAAG TCGTGCAACA GTCCGGTCTG TCCAGCGCCG TAGTCAGCGT
GATCAATTGA TGGGACCGTT TGGCATGGCG GCGCTCTATG TGGTGTTGAC GCTCGGCGCG
CTTGTGACAG CGTTTCCCTT TTATTTCATG CTGGTCGGCT CGACGCTGCG CAGTGCCGAT
ATTCTGCGTG TTCCGCCGCC GCTCTGGTTT GGCAATGCGT TCTGGAAGAA CTACGAGGAT
CTGCTGGCAG CCCTGCCGTT CTGGAATTCG CTCTGGAACA GCGTGGCGAT CGCCTCCATC
CACACGGCGC TGGTGCTCTT CTTCTGTTCA TTGGGCGGGT ATGGCTTTGC GAAGTTCCGC
TTCCCCGGTC GCAATATGCT GTTCGGATTC CTTCTGGCGA CGTTGATGGT GCCGGGTGTG
CTCGGGTTGA TCCCGTCGTT CGTCATTATG CGCACGCTCG GCTGGATCGA CACCTGGAAT
CCGCTCATCA TTCCAGGGAT TGCCAATGCG TTCGGCATTT TCTGGATGCG TCAGTATATC
GCTCAGGCGA TCCCGGACGA TCTGATCGAT GCGGCGCGGA TCGATGGGGC GCACGAGTTT
CGTATCTACT GGAATATTGT CGTTCCGGTC ATTGTGCCTG CGCTGGCGGC CCTCGCCATT
TTGACCTTCC TCGGCAAGTG GAATGAGTTC CAATTCCCGC TGCTCATTCT CAAACAGGAG
GAGAAGTATA CCTTGCCGGT TGCGCTCAGT ACGCTGCGCT CGCTGCGCGG CACCGAGATC
GGCGTGCAGA TTCTGGGCGC CGCCGGGGCG ATTGTGCCGA TATTGACCGT CTTCATTCTG
GCATCGCGTC AGTTTATGTC GGGTCTGACG GCTGGCGCCG TTAAGGGAAC GTGA
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| Protein sequence | MATTTQSRAT VRSVQRRSQR DQLMGPFGMA ALYVVLTLGA LVTAFPFYFM LVGSTLRSAD
ILRVPPPLWF GNAFWKNYED LLAALPFWNS LWNSVAIASI HTALVLFFCS LGGYGFAKFR
FPGRNMLFGF LLATLMVPGV LGLIPSFVIM RTLGWIDTWN PLIIPGIANA FGIFWMRQYI
AQAIPDDLID AARIDGAHEF RIYWNIVVPV IVPALAALAI LTFLGKWNEF QFPLLILKQE
EKYTLPVALS TLRSLRGTEI GVQILGAAGA IVPILTVFIL ASRQFMSGLT AGAVKGT
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