| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1876 |
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| Symbol | |
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| ID | 5539354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2409812 |
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| End bp | 2410309 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894014 |
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| Product | hydrogenase maturation protease |
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| Protein accession | YP_001431985 |
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| Protein GI | 156741856 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.252899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.719205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCCGA TTCTTGTGAT GGGATTGGGC AACGTGATCC TTCGTGATGA AGGGTTAGGT
GTGCGCGCGT TGCAGCGTCT GATGGAACGT TACGCGCTGC CCCACAATGT CGAAGCGATC
GATGCCGGTG CGCTTGGATT GTCGTTGCTC GCCTTTCTCG ATGGCGTCGA GGACGTGCTG
ATCATCGACG CTGTTCACAG CGGCGGACGA TCAGGAACGC TCGTTCGACT CGAAGGGGAA
GAAATCGCGC GTGCCGAAGC CTTGCACCTC TTGCCGCAGG ATGTTCGTTT GCATGAACTG
ATCGCCCTGC ACGGGAAGGG AGGATCATCG CCGCAGCGAA TAGTGCTCTG GGGAATGGCG
CCAGAAACCT CCGAACCAGG GCTGGAGTTG ACCCCTGCAT GCGAAGCGCG GCTCGATGCA
CTCGTCGACG CCATTGTGCA GGAACTCCGC TCGTGGGGTG TCGATGTGCG ACCGCTCCAG
GAGTGTCAGA CCGGTTAG
|
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| Protein sequence | MAPILVMGLG NVILRDEGLG VRALQRLMER YALPHNVEAI DAGALGLSLL AFLDGVEDVL
IIDAVHSGGR SGTLVRLEGE EIARAEALHL LPQDVRLHEL IALHGKGGSS PQRIVLWGMA
PETSEPGLEL TPACEARLDA LVDAIVQELR SWGVDVRPLQ ECQTG
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