| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1867 |
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| Symbol | |
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| ID | 5539345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2386418 |
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| End bp | 2387914 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894005 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001431976 |
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| Protein GI | 156741847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGAC TCCAATTCCA TCAGGCGTTT GCGTCGGCTG GCAGGCGCGC AGTTGCCGCA
TTCGAGGCGA TCCTGCATCG TATTCCGGCG GTGCAGCGCC GGCTCGAAGC GCGGTATGAG
GCACTGCTTG CCGACATCGA ACCGTCGCTC AAGCCATACC GCAACGAACT GCCTGCCATC
ACTCGCTTGC CAACCATCGG GCGCAGCCGC GACGAGATTC TGGACGAGAT GCGTCGTTTG
GCGGAACGCG AGACCCCGCG CTGGCGTGAG GGGTATGTGT CAGGCGCCGT CTACCACGGC
GATCCCGACC ATCAGGCGTT TTTGAGCCAG GCATATGCGC TCCATGCGGC GAGCAACCCG
CTCCACGTCG ATCTCTGGCC CAGCATCGCC AGATACGAAT CTGAGATTGT TGCTATGACC
GCGTCGATGC TCGGTGGCGC CTCCGGCGTT TGCGGCACAG TCACCTCTGG CGGCACCGAG
AGCATTCTGC TGGCGATGAA GACTTACCGT GACTGGGCGC GCGAGCGGCG CGGCATCCGT
CGTCCTGAAG TGGTTGTTCC ACATACTGCG CATGCTGCGT TCGACAAAGC GGCACACTAT
TTCGGCATCC GGTTGGTGCG CATTCCGGTG GATGCCGGCT TTCGCGCCGA TGTGTCGGCT
GTGCGACGCG CCATCAGCCA TAATACGATT GCGCTGGTTG GATCGGCGCC CTCATTCCCG
CACGGCGTCA TCGATCCCAT CGCCGACATA GCGGCGCTGG CGAGGGAGCG GCGCATTGGC
ATGCACGTCG ATGCCTGTCT CGGCGGATTT GTGCTTCCCT GGGCGCGTCG GCTCGGCTAC
CCCGTTCCGC CGTTCGACTT CAGCGTTCCC GGTGTCACCT CGATCTCAGT GGATACCCAC
AAGTACGGGT ATGCTGCCAA GGGAACCTCT GTTGTCCTCT ACCGCACCGA AGCGCTGCGC
CGCTACCAGT ACTACGTTGC TGCCGACTGG CCCGGCGGGT TGTACGTTTC GCCAACGATG
GCAGGCAGCC GCCCCGGCGG GCTGAGCGCT GCCGCATGGG CTGCCATGGT CAGCATTGGC
GAGCAGGGGT ATCTGGAGGC GACCCGCCGC ATCCTGGAGA CTGCGCGCCG GATCCGCTGC
GGCATCGAGT CCATTCCAGA GTTGCGCGTC CTCGGCGACC CGCTATGGGT GATCGCGTTC
GCTTCAATGC GTCTCGATAT CTATCGTGTG CTCGATCAGA TGGCGCAGCG CGGCTGGAAC
CTCAACGGGC TGCATCACCC ACCTGCTATC CACATCTGCG TTACCTTGCT GCACACGCAG
CCTGGCGTCG CCGATCGTTT CATCGCCGAC CTGCGCGATG CAGTTGCCGC CGTGCGCCGC
GAGCCGCGCG CCAGAGGCGG AATGGCGCCG GTGTACGGTA TGGCTGCATC GCTGCCGTTC
CGCAGCGTCG TCAGTGATCT GTTGCGGCGA TACCTGGATG CGGTGTATCG GGTGTAA
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| Protein sequence | MRGLQFHQAF ASAGRRAVAA FEAILHRIPA VQRRLEARYE ALLADIEPSL KPYRNELPAI
TRLPTIGRSR DEILDEMRRL AERETPRWRE GYVSGAVYHG DPDHQAFLSQ AYALHAASNP
LHVDLWPSIA RYESEIVAMT ASMLGGASGV CGTVTSGGTE SILLAMKTYR DWARERRGIR
RPEVVVPHTA HAAFDKAAHY FGIRLVRIPV DAGFRADVSA VRRAISHNTI ALVGSAPSFP
HGVIDPIADI AALARERRIG MHVDACLGGF VLPWARRLGY PVPPFDFSVP GVTSISVDTH
KYGYAAKGTS VVLYRTEALR RYQYYVAADW PGGLYVSPTM AGSRPGGLSA AAWAAMVSIG
EQGYLEATRR ILETARRIRC GIESIPELRV LGDPLWVIAF ASMRLDIYRV LDQMAQRGWN
LNGLHHPPAI HICVTLLHTQ PGVADRFIAD LRDAVAAVRR EPRARGGMAP VYGMAASLPF
RSVVSDLLRR YLDAVYRV
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