Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1866 |
Symbol | |
ID | 5539344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2384854 |
End bp | 2386416 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894004 |
Product | carbohydrate kinase FGGY |
Protein accession | YP_001431975 |
Protein GI | 156741846 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTCCG ACAAGCCCAT CCTGGCGATT GACCTGGGAA CCTCCGGTCC CAAGGTTGCG TTGGTGACCC CCAGCGGCGA TATTCTGGCG TGGGAATTCG AGCCGGTGCG ATTACACCTG TTGCAGGGCG GAGGCGCAGA GCAGAGCGCC GTTGAATGGT GGGAGGCAAT CGGCATAGCA GCGCGCCGCC TGACCGCCGC AACCGGCGTC ACCCGTGTCG CTGCGGTCGG CGCGACGGCG CAGTGGTCGG GCACGGTCGC GGTCGGCAAC GATGATCGTC CGCTTACGAA CGCGATCATC TGGATGGATT CACGCGGCGC GCCGGATGTT CATGCTCTGG TTGCCGGTCG TCCGAAGGTT GCCGGGTATG GGCTGGCGAA ACTGGCGACC TGGATTCGGC TCACCGGCGG CGCTCCTGGT CTCGCTGGAA AGGATTCGCT GGCGCACATC CTGTATCTGC GGCGGTCGCA TCCCGATGTG TACCGCTCTG CGAGCGTCTT TCTTGAACCC AAGGATTACA TCAACCTGCG TCTCACCGGC GTGCGCGCTG CGTCGTTCGA CTCGATCACG CTCCACTGGC TGACCGATAA TCGCGCCATT GATCGGGTCG CGTATGCGCA ACAGTTGCTG ACGTTGACCG GCATTGAGCG TGTGAAACTG CCCGATTTGC GCCGCGCGAC CGACATCCTT GGTCCGCTTA CTCCAGAAGC TGCCGGGCAT CTCGGCATCG AGCCGGGAGC GCCGGTGGCG GTCGGATCAT CGGATATTCA TTCAGCGGCT ATCGGCGCCG GCGCAGTGCG CGACTACGAC GCCAATCTGT ATGTGGGCAC GTCGTCGTGG TTCGTCTGCC ACGTGCCGTT CAAGCGCACC GATCTGTTCC ACAACATGGC GTCGCTGCCG TCGGCAATTC CGGGAAAGTA TCTGCTCACC AATGAGCAGG AGTGCGCCGG CGCCTGCCTG ACATTCCTGC GCGATAATCT GTTGTTCGCC GATGATGAAC TGGCGACGCC GCTCCCGGAT GGGTTCTATG CGGCGCTGAA CCGCATGGCG GCGCGCGAAG CGCCCGGCAG CGGCGGGCTG ATCTTTACCC CCTGGCTGTA CGGGGAGCGC ACCCCGGTCG AAGATCACAC GCTCCGCGGC GGGTTTCACA ATCTGTCGCT GACAACCTCC CGGGCGCAGA TAGCGCGTGC CGTGATGGAA GGGGTCGCCT ACAATATGCG CTGGTTGCGC GATGCGGTGC GCCGTTTTCT GCGACGCTCA CCCGGCGCGG TCATCATGAC CGGCGGCGGC GCGCAGTCCG CTGTCTGGTG CCAGATCTTC GCCGATGTGC TGGGATGTCC TATCCATCAG GCGACACATC CGCTTCTTGC CAATGTGCGT GGTGCGGCAT TGATTGCGGC AGTTGCGATT GGAAGCCAAT CCTTCAATCG CATCCAGGCG CCGGTGGCTG CGACCTTTCA CCCGCGCCGC GAGCATCGGC GCATCTATGA CGAATTATTT CGCGTGTTTG TGCGCATCTA TCGGCAGAAT CGGGATATTT ACGCGCACCT GAATCGGAGG TGA
|
Protein sequence | MTSDKPILAI DLGTSGPKVA LVTPSGDILA WEFEPVRLHL LQGGGAEQSA VEWWEAIGIA ARRLTAATGV TRVAAVGATA QWSGTVAVGN DDRPLTNAII WMDSRGAPDV HALVAGRPKV AGYGLAKLAT WIRLTGGAPG LAGKDSLAHI LYLRRSHPDV YRSASVFLEP KDYINLRLTG VRAASFDSIT LHWLTDNRAI DRVAYAQQLL TLTGIERVKL PDLRRATDIL GPLTPEAAGH LGIEPGAPVA VGSSDIHSAA IGAGAVRDYD ANLYVGTSSW FVCHVPFKRT DLFHNMASLP SAIPGKYLLT NEQECAGACL TFLRDNLLFA DDELATPLPD GFYAALNRMA AREAPGSGGL IFTPWLYGER TPVEDHTLRG GFHNLSLTTS RAQIARAVME GVAYNMRWLR DAVRRFLRRS PGAVIMTGGG AQSAVWCQIF ADVLGCPIHQ ATHPLLANVR GAALIAAVAI GSQSFNRIQA PVAATFHPRR EHRRIYDELF RVFVRIYRQN RDIYAHLNRR
|
| |