Gene Rcas_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1866 
Symbol 
ID5539344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2384854 
End bp2386416 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content63% 
IMG OID640894004 
Productcarbohydrate kinase FGGY 
Protein accessionYP_001431975 
Protein GI156741846 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCG ACAAGCCCAT CCTGGCGATT GACCTGGGAA CCTCCGGTCC CAAGGTTGCG 
TTGGTGACCC CCAGCGGCGA TATTCTGGCG TGGGAATTCG AGCCGGTGCG ATTACACCTG
TTGCAGGGCG GAGGCGCAGA GCAGAGCGCC GTTGAATGGT GGGAGGCAAT CGGCATAGCA
GCGCGCCGCC TGACCGCCGC AACCGGCGTC ACCCGTGTCG CTGCGGTCGG CGCGACGGCG
CAGTGGTCGG GCACGGTCGC GGTCGGCAAC GATGATCGTC CGCTTACGAA CGCGATCATC
TGGATGGATT CACGCGGCGC GCCGGATGTT CATGCTCTGG TTGCCGGTCG TCCGAAGGTT
GCCGGGTATG GGCTGGCGAA ACTGGCGACC TGGATTCGGC TCACCGGCGG CGCTCCTGGT
CTCGCTGGAA AGGATTCGCT GGCGCACATC CTGTATCTGC GGCGGTCGCA TCCCGATGTG
TACCGCTCTG CGAGCGTCTT TCTTGAACCC AAGGATTACA TCAACCTGCG TCTCACCGGC
GTGCGCGCTG CGTCGTTCGA CTCGATCACG CTCCACTGGC TGACCGATAA TCGCGCCATT
GATCGGGTCG CGTATGCGCA ACAGTTGCTG ACGTTGACCG GCATTGAGCG TGTGAAACTG
CCCGATTTGC GCCGCGCGAC CGACATCCTT GGTCCGCTTA CTCCAGAAGC TGCCGGGCAT
CTCGGCATCG AGCCGGGAGC GCCGGTGGCG GTCGGATCAT CGGATATTCA TTCAGCGGCT
ATCGGCGCCG GCGCAGTGCG CGACTACGAC GCCAATCTGT ATGTGGGCAC GTCGTCGTGG
TTCGTCTGCC ACGTGCCGTT CAAGCGCACC GATCTGTTCC ACAACATGGC GTCGCTGCCG
TCGGCAATTC CGGGAAAGTA TCTGCTCACC AATGAGCAGG AGTGCGCCGG CGCCTGCCTG
ACATTCCTGC GCGATAATCT GTTGTTCGCC GATGATGAAC TGGCGACGCC GCTCCCGGAT
GGGTTCTATG CGGCGCTGAA CCGCATGGCG GCGCGCGAAG CGCCCGGCAG CGGCGGGCTG
ATCTTTACCC CCTGGCTGTA CGGGGAGCGC ACCCCGGTCG AAGATCACAC GCTCCGCGGC
GGGTTTCACA ATCTGTCGCT GACAACCTCC CGGGCGCAGA TAGCGCGTGC CGTGATGGAA
GGGGTCGCCT ACAATATGCG CTGGTTGCGC GATGCGGTGC GCCGTTTTCT GCGACGCTCA
CCCGGCGCGG TCATCATGAC CGGCGGCGGC GCGCAGTCCG CTGTCTGGTG CCAGATCTTC
GCCGATGTGC TGGGATGTCC TATCCATCAG GCGACACATC CGCTTCTTGC CAATGTGCGT
GGTGCGGCAT TGATTGCGGC AGTTGCGATT GGAAGCCAAT CCTTCAATCG CATCCAGGCG
CCGGTGGCTG CGACCTTTCA CCCGCGCCGC GAGCATCGGC GCATCTATGA CGAATTATTT
CGCGTGTTTG TGCGCATCTA TCGGCAGAAT CGGGATATTT ACGCGCACCT GAATCGGAGG
TGA
 
Protein sequence
MTSDKPILAI DLGTSGPKVA LVTPSGDILA WEFEPVRLHL LQGGGAEQSA VEWWEAIGIA 
ARRLTAATGV TRVAAVGATA QWSGTVAVGN DDRPLTNAII WMDSRGAPDV HALVAGRPKV
AGYGLAKLAT WIRLTGGAPG LAGKDSLAHI LYLRRSHPDV YRSASVFLEP KDYINLRLTG
VRAASFDSIT LHWLTDNRAI DRVAYAQQLL TLTGIERVKL PDLRRATDIL GPLTPEAAGH
LGIEPGAPVA VGSSDIHSAA IGAGAVRDYD ANLYVGTSSW FVCHVPFKRT DLFHNMASLP
SAIPGKYLLT NEQECAGACL TFLRDNLLFA DDELATPLPD GFYAALNRMA AREAPGSGGL
IFTPWLYGER TPVEDHTLRG GFHNLSLTTS RAQIARAVME GVAYNMRWLR DAVRRFLRRS
PGAVIMTGGG AQSAVWCQIF ADVLGCPIHQ ATHPLLANVR GAALIAAVAI GSQSFNRIQA
PVAATFHPRR EHRRIYDELF RVFVRIYRQN RDIYAHLNRR