Gene Rcas_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1860 
Symbol 
ID5539338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2376868 
End bp2378097 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID640893998 
Productmolybdenum cofactor synthesis domain-containing protein 
Protein accessionYP_001431969 
Protein GI156741840 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.647433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC TGTTTCAGGT AGTGACCGTC GCCGAGGCGC GTGCCCGCCT TGGCGCTCAC 
ATCGTTCCTC TATCACGGCG CGAGGTGATC CCGCTCCACG AGGCGCTCGA CCGGGTGCTG
GCTGAAGAGT TGCGCTCACC GGTCGATCTC CCTGCTTTTC CGCGCTCCAC AGTGGATGGT
TTTGCGGTGC GCGCTGTGGA CACCTATGGC GCCAGCGAGA GTCTTCCAGC CTACCTGACA
CTCTGTGGCG AGGTTCCGAT GGGTCGCGCG CCCGAATTCA CCGTCACTTC GGGAGAGGCT
GCGCTCATCC ACACAGGCGG GATGCTCCCT TCCGGCAGTG ACAGCGTCGT GATGGTCGAG
TATACGCAGC GCCTCGATCC CACGATGATC GAAGTCGTGC GCCCCGTGGC GATTGGCGAA
AACGTCATCC CCGTTGGCGA GGATGTATCG CGGGGTGATC TGCTCTTCCC CCGCGGTCAC
CGGCTCCGTC CGCAGGACCT CGGAGGGTTG GCAGGCGTCG GCATTGTGCG CGTCCCTGTC
GTTGCCCGTC CGCGCGTCGC TATCCTTGCC TCAGGCGACG AGATCATTCC TGCCGACGCC
GACGTGGCGC CCGGACAAGT GCGCGACATC AACAGTTATA CGATTGCCGC TCTGGTGCGG
CGTGCCGGTG GTGAGCCTGT TCTTTGCGGC ATTGCTCCGG ACGATCCGAC CATTTTGGAT
CGAATGGCGC GCAGCGCGCT CGAAGGCGCC GATCTTCTCG TGCTCTCCGC CGGCAGTTCG
GTAAGCGCGC GCGACTATAC AGTCCGCGTG ATTGAGGCGC TCGGCGCTCC AGGAGTGCTG
GTGCACGGGG TGGCCATTCA CCCTGGTAAG CCCACGATCA TTGCCGTGGC TGATGAACGG
CCCGTCTTCG GCTTGCCCGG CAACCCGGTC TCAGCGATCA TCGCCTTTGG TCTTTTTGTC
GCTCCGGCGC TGCGCCGACT CCAAGGCGCC CTTGAGGTGG ACCCGCCGAC CGTCCAGGCT
GTTCTGACGC TTAATATTGC CTCGAAACCT GGACGCGAGG ACTTTGTGCC GGTGCGCCTC
GAGCGGCGTG ATGGGGCGCT GCGAGCCGAA CCGGTGTTTG GGAAGTCGAA TCTGATCTAC
ACTCTGGCGC ACGCCGATGG TCTTGTGCGC GTTCCTCTCG ATTTGAGCGG GCTGTACGCT
GGTGATACGG TGGAGGTCGT GCTGTTCTGA
 
Protein sequence
MPDLFQVVTV AEARARLGAH IVPLSRREVI PLHEALDRVL AEELRSPVDL PAFPRSTVDG 
FAVRAVDTYG ASESLPAYLT LCGEVPMGRA PEFTVTSGEA ALIHTGGMLP SGSDSVVMVE
YTQRLDPTMI EVVRPVAIGE NVIPVGEDVS RGDLLFPRGH RLRPQDLGGL AGVGIVRVPV
VARPRVAILA SGDEIIPADA DVAPGQVRDI NSYTIAALVR RAGGEPVLCG IAPDDPTILD
RMARSALEGA DLLVLSAGSS VSARDYTVRV IEALGAPGVL VHGVAIHPGK PTIIAVADER
PVFGLPGNPV SAIIAFGLFV APALRRLQGA LEVDPPTVQA VLTLNIASKP GREDFVPVRL
ERRDGALRAE PVFGKSNLIY TLAHADGLVR VPLDLSGLYA GDTVEVVLF