| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1837 |
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| Symbol | |
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| ID | 5539315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2346377 |
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| End bp | 2347156 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893975 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001431946 |
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| Protein GI | 156741817 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01452] phosphoglycolate/pyridoxal phosphate phosphatase family
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATCC CTCACTACAA CGCCTATATT TTCGACCTCG ACGGCACCGT CTACCTTGGC
GATGCCCTGT TGCCCGGCGC GGCTGAGGCG ATCACGCGCC TGCGCGCCGC CGGATCGAAG
GTCGTCTTCC TTTCCAACAA CCCGACCCGC ACCCGCGCGC AGTACGCCGC GAAGTTAACC
GCGCTCGGCA TTCCGACCAT GGCAGACGAG GTCATCAACT CATCGTATGT GATGGTGCGC
TGGTTGCTGG CGGAAGCGCC AGGGAGTCGG GTGTTCGTTG TGGGCGAACC ACCCCTCTGC
GACGAACTGC GCACCGCCGG GTTCGACCTC GCCGATGATG CCGATGGCGT CCGATTTGTG
ATCGCCTCGT TTGACCGCAC CTTCACCTAC CGCAAGTTGC AGATCGCCTT CGACGCCATC
CGCGCCGGGG CGCGCTTCGT CGCCACTAAT CCCGACCGCT ACTGCCCGAC TCCCACTGGC
GGCGAACCGG ACGCAGCGGC GATGATTGCG GCTATTGAGG CGTGTACTGC TCACCCGGTC
GAAGTCGTTG TCGGCAAGCC ATCGCCGATC ATGGTGCAGA CGATCGCCGA AACGCTGCGT
TTGCCGCCAG CACAGTGCCT GGTCGTCGGC GACCGGCTGG AGACCGACAT TGCGATGGGG
CGCGCCGCAG GCATGGCGAC CGCGCTGACG CTCACCGGCG CAACCGACCG CCGCGCGCTG
GCGGAGGCGA CCATCCAGCC GGATTATGTC ATCGAGTCCC TTGGCGCACT GATTGAGTGA
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| Protein sequence | MPIPHYNAYI FDLDGTVYLG DALLPGAAEA ITRLRAAGSK VVFLSNNPTR TRAQYAAKLT
ALGIPTMADE VINSSYVMVR WLLAEAPGSR VFVVGEPPLC DELRTAGFDL ADDADGVRFV
IASFDRTFTY RKLQIAFDAI RAGARFVATN PDRYCPTPTG GEPDAAAMIA AIEACTAHPV
EVVVGKPSPI MVQTIAETLR LPPAQCLVVG DRLETDIAMG RAAGMATALT LTGATDRRAL
AEATIQPDYV IESLGALIE
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