Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1821 |
Symbol | |
ID | 5539299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2330111 |
End bp | 2330509 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893959 |
Product | hypothetical protein |
Protein accession | YP_001431930 |
Protein GI | 156741801 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.977434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTGA AGACCGATCG GCGTCGTGCG CTGGCGATGA CCATTCCAGA GGCGCCGGTC TGGCGGTTGA GCCTGGAGCA GTGCTATCAC ATAATCCAGA CCGGCATCCG CACCGACGAT GATTCCGTCG AGTTTCTCGA AGGGTTGTTG GTGACGAGCA CGCCCAAAAA TTCGTCGTAT AACCTTGCGG CACATTTGAC ACGCAACGCG CTTACGCAGG TTGTGCCAGC GCAATGGTAT ATTGATGCGC AGGAACCATT CACCGCTGAC GTGAGCGAGC CGGAACCGGA TGTTCTGGTC GTCTGTGGCG AGCGCCGTAT CACGGTCACC ACCCGCAGGA CATTGCGCTG GTTGTGGAAG TGGCAGATAC CACGCTCAAG CGGGATCGAA CCGGTATGA
|
Protein sequence | MTVKTDRRRA LAMTIPEAPV WRLSLEQCYH IIQTGIRTDD DSVEFLEGLL VTSTPKNSSY NLAAHLTRNA LTQVVPAQWY IDAQEPFTAD VSEPEPDVLV VCGERRITVT TRRTLRWLWK WQIPRSSGIE PV
|
| |