| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1820 |
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| Symbol | |
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| ID | 5539298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2328879 |
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| End bp | 2330114 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893958 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001431929 |
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| Protein GI | 156741800 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2339] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.335053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTT CGGCGAAACT GGTTGCGCGC GCAATGGTCG GGTCTCCTAT CGCGCGACCC
TTTGGAGGGT GTTTGTTTGT TGCGGGGATG CTGGCGCTGC TCGGCTTTGC ATTCCTGGGA
CATTTGGCGC TCTGGATTCT GGAACCTGTT ACTCGCGTCG GCATTTTTCT GACCGGTGTT
CTGATCGGTA CGGTTGCATC GCTTCCCCTT CTGGCGCTGC TGCGCTGGCT CGACCGGCGC
GAGCGCGAGT CGCTCTGGCT GGCGATCGGC GCTGTGGTGT GGGGCGCCGT TATCAGCACC
GGTCTCTCTG CCATCTTCAA TGCGCTTGGC TTTGGCTTCA TCTCGGTCAG CCTGGAGATC
GTCGGCGGGG TCGATTCCGA ATTGATCGGG CAGTTGCTTG CGGCGACGCT GGTTGCGCCG
CCGGTTGAGG AAGCGTTCAA GGGGCTGGCG ATCCTGGTGC TCTTCTGGTT TCTGCGCGCC
GAGTTCGACA ATGTGCGTGA TGGTATCATC TATGGCGCTT TGGTCGGGAT CGGATTCAAT
ATCGCCGAGT ATGCGCTTTA TGTGATGCAG GGGTACGCCG AAAGCGGCGT CGCGCCTTTC
GCCGAGCAGT TCGCCGGTCG TTTCGTCTTC CTCGGTTTCA ATGGGCATAT GCTCTGGAGC
GCCATCTGCG GCGCTGGCGT CGGGTTTGCG CGCCAGTCAA CTGGCGGCGG TTGCACCACG
CTGGGAGCGC CGGTCGCCGG ATACCTGGCG GCAACGTTCG GTCACGCACT CAACAATTCG
GTTGGCGTCT TCCTTCTGGG AGTCATTCTG GTCGTGATGG GGTATGATGT CGAAGGCGGG
TTGATGAGCG TCTCGCCTTT TGCGCTGTGG ACGGCGGCAG CAATTATGAA TGTGCTGGTG
CAGGGCGTGT TCTACGTTGC GTTGCTGGTG TTGCTGGCGC TGACCTCGCG CTGGGAGCGC
GAAGTGATCC GCACCTACCT GGCGGACGAG GTTGGCGTCA GCGTCACGCC CGAAGAGTAT
TCCGCAATTG TGAATGATCG TATGTTTGGC GCACTGGGAA GCCGCGGCAC TCCGTGGCAG
TTGGCGCTGG CGCAGAATGA ACTGGCATTC CGCAAATGGC ACGTCGCGCG CGAAGGCGGC
AACCCGGCGA CCGATCCGCT GGTTGCGGCA TGGCGCCAGG ATATTGCGAC GCTCCGTGAA
GAATGGCTTC GTTCTCGACA GGTGAGTCAG GCATGA
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| Protein sequence | MPASAKLVAR AMVGSPIARP FGGCLFVAGM LALLGFAFLG HLALWILEPV TRVGIFLTGV
LIGTVASLPL LALLRWLDRR ERESLWLAIG AVVWGAVIST GLSAIFNALG FGFISVSLEI
VGGVDSELIG QLLAATLVAP PVEEAFKGLA ILVLFWFLRA EFDNVRDGII YGALVGIGFN
IAEYALYVMQ GYAESGVAPF AEQFAGRFVF LGFNGHMLWS AICGAGVGFA RQSTGGGCTT
LGAPVAGYLA ATFGHALNNS VGVFLLGVIL VVMGYDVEGG LMSVSPFALW TAAAIMNVLV
QGVFYVALLV LLALTSRWER EVIRTYLADE VGVSVTPEEY SAIVNDRMFG ALGSRGTPWQ
LALAQNELAF RKWHVAREGG NPATDPLVAA WRQDIATLRE EWLRSRQVSQ A
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