| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1819 |
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| Symbol | |
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| ID | 5539297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2328255 |
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| End bp | 2328869 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893957 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001431928 |
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| Protein GI | 156741799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0368429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGC GCAGCAGAGC AGTCGGTCCC TGGCCCATGA ACAGTTATGC ACTGGTTTGC
CCGACGACGC GCCACAGTGT TCTGATCGAT CCCGGCGCGG AATCGGACGA ACTTATCGCT
ATGCTCGACG ACACGACTCC GGTTGCCATT TTGCTGACGC ATACCCATCC CGATCACATC
GGCGCACTCG AGGAGGTGCG CAACCGGCTC GGTGTGCCGG TCTTCGCCCA TCCCGGCCCC
TGCGTTGCCG GCATGGCGCC CGTTGATCGC GCGCTGGCGC ACGGTGATGT GGTGACGGTC
GGTGACTCGG TGATTCGGGC ATGGCACACC CCTGGTCACA CCGCTGATAT GGTGTGCTAT
CTGGTGGAGG GCGCGCCGAT TGCTGTCGTT GGCGACACCC TGTTTGACGG CGGACCGGGA
CGCACCTGGT CGGTAGACGA TTTTCACACA ACTCTTGTTA CGTTGCGTAC CATCGTGCTG
ACCTGGAGCG ATGACACGAT CTGCTACCCT GGTCATGGTC CATCCTTCCG GCTTGGCGAC
CGGCGCGCCG CTATCGAGCG CTTCCTGGCG CATGCGCCCG AAGGTTTTTG TGGCGATGCC
ACATGGGATG TGTGA
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| Protein sequence | MELRSRAVGP WPMNSYALVC PTTRHSVLID PGAESDELIA MLDDTTPVAI LLTHTHPDHI
GALEEVRNRL GVPVFAHPGP CVAGMAPVDR ALAHGDVVTV GDSVIRAWHT PGHTADMVCY
LVEGAPIAVV GDTLFDGGPG RTWSVDDFHT TLVTLRTIVL TWSDDTICYP GHGPSFRLGD
RRAAIERFLA HAPEGFCGDA TWDV
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