| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1818 |
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| Symbol | |
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| ID | 5539296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2325760 |
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| End bp | 2326875 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893956 |
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| Product | peptidase M50 |
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| Protein accession | YP_001431927 |
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| Protein GI | 156741798 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0171111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGAGA GTTTGCCCGA CGGTCTGGTC ACCATTGCTG CATTCCTGCT CATGCTCGGG
CTGCTGGTGC TGGTTCACGA GTTGGGTCAT TTTCTGACAG CGGTCTGGTT CGGCATCAAA
GTCGAAGAGT TTGGGTTGGG ATATCCGCCG CGCGCGATGG TGCTCTTTGA GCGAAATGGC
GTCAAATACA CGCTCAACTG GCTGCCGATC GGCGGGTTTG TGCGCTTCGG CGGCGAAGGC
GAGCAGATTT ATGGCGTCGG TAGTCTTTCC GCAGCATCGC CATGGAAGAA AATTGCCGTT
TTGTTCGCCG GACCATTGAT GAATCTGCTG CTGGCATTCC TGATCTTCAG CGGCATCTTT
ATGGCGCGTG GCGTTCCTGA GGCATTCAAT GGCGCGCGCA TCGATGTCGT CTACCCGGCG
ACCCCAGCCG AACGCGCCGG GTTGCAGAGC GGCGATCTGC TGGTGTCGCT CAACGGGCGC
ACACTCGACA CCGACCTGAG CGTCATTCGC CTGATTGCGG CAGAGAACCG GGGGCGCACG
ATTGAGGCGG TCGTGGAGCG CGATGGGGCG CGCGTGGTGC TGATGATCAC TCCCGGTCCC
TGGCAACGTG ACGGCGTTGC GTTTGAGAAT GGGTTCGGCT TCGCCTATAC GCCCAACATT
CAGATCGTTC CGGCAACGCC GCTCAAGGCG CTCAACGCCG GTTTTTCCTA TACGTTCGAC
ATTCTGGGGC GGTTCATCGC TGGCATTGGT CAGATGCTCG GCAGCCTGTT GGGAATCACC
GAAGCGCCAC AGGGCGGGGT CGCCGGCGTC GTCGGCATTG CCCGCGGCAC CGGAGAGGTC
ATTCAGCGCG ATGGCTGGCT CGGCTTCTGG CAGTGGACGG CGCTCATCAG TCTCAATCTG
TTCCTGATCA ACCTGTTGCC CATCCCGGCG CTCGATGGCA GCCATATTCT CTTTTCGCTG
ATCGAGATCG CGCGTGGCGG TAAGAAGATC CCGCCTGAAC GCGAGGCGAT GGTCCATGCT
ATTGGCTTCA TGATGCTCAT GGGGCTGATG GTGGTCATTA CCGTCTCCGA TGTAGCAAAC
TGGATCGGCG GCAATCCGGT GTTGGGTGGC GGATAG
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| Protein sequence | MFESLPDGLV TIAAFLLMLG LLVLVHELGH FLTAVWFGIK VEEFGLGYPP RAMVLFERNG
VKYTLNWLPI GGFVRFGGEG EQIYGVGSLS AASPWKKIAV LFAGPLMNLL LAFLIFSGIF
MARGVPEAFN GARIDVVYPA TPAERAGLQS GDLLVSLNGR TLDTDLSVIR LIAAENRGRT
IEAVVERDGA RVVLMITPGP WQRDGVAFEN GFGFAYTPNI QIVPATPLKA LNAGFSYTFD
ILGRFIAGIG QMLGSLLGIT EAPQGGVAGV VGIARGTGEV IQRDGWLGFW QWTALISLNL
FLINLLPIPA LDGSHILFSL IEIARGGKKI PPEREAMVHA IGFMMLMGLM VVITVSDVAN
WIGGNPVLGG G
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