| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1813 |
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| Symbol | |
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| ID | 5539291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2322755 |
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| End bp | 2324392 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893951 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431922 |
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| Protein GI | 156741793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5401] Spore germination protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC CAACGCCAAC TGGTCCGGGG TATTGCCCGT ATCTTGGTCT GAAACAGAAT
CGCGCCATCC GGTTTTCGTC GCCGACGCCG GAGCATCGCT GTTATGTCAG CGGCGAGCCG
GTCGATATAC CTGTTGATCA GAGCGCATTC TGCCTTTCTC GCAATCATGT TCAGTGCCCA
TTATACATGG GTTTAACCCT CCCCTCAATC CCGGCAACGG TCAGTTCATC CGGTGCGACC
ACGACAGCGC CCGGCGGATT GCGTGGCTGG CTACGCACGC TGTCGCCGCG CGACCGCGCG
ATCTATGCCT TGATGCTGGG CATGCTGGCG CTAATCGTGC TTGTGTACGC TATTGCGGGA
TGGCAGGCGC TGACCGGGAC TGCGCCGGTC ACAGGCGCAC CTTCGCCGAT AACCGTGGCG
CCGCCGGAGA CGGCGACCGC AACCCCGGCG CCGCTCCCCT CTCCATCGGC AACGGCGACG
CCGCCGCCTC CCACTCCCAC TGCGTTGCCA ACCAGTACGC CCTCGCCGCA ACCGAACCCG
TCGCCAACTC AGGAACCGGT GATTATCGTG CCAACGGCGC TGCCGACGCA ACCGACCGGT
ACTGCCGGTG TCGCGCCTTC GCCAACCGAC AACGCGACGG CAACACCATC GCCAACGGTC
GCTGCACCGG CAACACCTTC CCCAACAGGT CAACCGGCGC CGGCGTCTCC GACTCTCACG
GCAACCGCAG CGCCGCCGCC AACGACAGCG CCGACCGCAC CTCCGCAACC GCCGACTGCC
GTGCCGCCAG CAATGCCGCG AACGCCTGCG CCGCCGGCGG CGCCGACGGT TCAGCAGCAA
CGATTGTGGC TCTACTTCGG TGATGCGACC GGCACACTCT TCGTTCCTGT CCAGCGGCTC
GTTCCGGTTG AAGATCGCAA AGTAGCCACT GCCGCTATCA ACGCCTTGAT CGAGGGTCCT
CGCAATGGGC TTGAGCGTTT GATCGATCCG CAGGCGCGCC TCTTGAGCAT TGCCATCAAC
AACGGGCTTG CCACAGTCAA CTTTGACCGC CCGCCGCACC TGAACGGCGA TCCGCGCGGA
TTGCACTCAA TCGTCCTGAC CCTGACCCAC TTCGAGACGA TCAGCCGGGT GCAGTTCCAG
GTCAACGGCA GGAACATCGG CATCGATGGG AGCGGTCCAA TCGGGCGCCC GGTCGTCAAC
CCGTTGAACC CGAACAACCT GCCGGTGGAT TATGCTGCCA CCGAGTTTCT ACCGACGTAT
TACCTGGCGA ACGATGGGTA TCACACAATC CGCATCATTC GCATGGTGCC AAAGACGCGC
CAGGTGGCAG AGGGAACGGT GCGCGCGCTC ATCGAGGGAC CGGGAATCTA CGAGTACGCT
GTGCAGCGCA CCATTCCGCC GGGAACCGAA CTTCGCGCCA TCAGCATCAA CCAGGGAGTC
GCGCGGGTCG ATTTCAGCGC CCGATTCGCC GAAGCGTCGG ATCGCAACGC GGCAGTGCGC
ACGCTGGTCG AATCGCTGAC TACGCTGCCG CGTGTCAGCG GGGTGCAGAT CCTGGTTGAA
GGTCGCTCAC TTGCGGAATG GTGGGGAGAG CCATATGGCA GGGTCTATCC AAAGCCGCTG
ATCAACCCGG AAGGATGA
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| Protein sequence | MSEPTPTGPG YCPYLGLKQN RAIRFSSPTP EHRCYVSGEP VDIPVDQSAF CLSRNHVQCP
LYMGLTLPSI PATVSSSGAT TTAPGGLRGW LRTLSPRDRA IYALMLGMLA LIVLVYAIAG
WQALTGTAPV TGAPSPITVA PPETATATPA PLPSPSATAT PPPPTPTALP TSTPSPQPNP
SPTQEPVIIV PTALPTQPTG TAGVAPSPTD NATATPSPTV AAPATPSPTG QPAPASPTLT
ATAAPPPTTA PTAPPQPPTA VPPAMPRTPA PPAAPTVQQQ RLWLYFGDAT GTLFVPVQRL
VPVEDRKVAT AAINALIEGP RNGLERLIDP QARLLSIAIN NGLATVNFDR PPHLNGDPRG
LHSIVLTLTH FETISRVQFQ VNGRNIGIDG SGPIGRPVVN PLNPNNLPVD YAATEFLPTY
YLANDGYHTI RIIRMVPKTR QVAEGTVRAL IEGPGIYEYA VQRTIPPGTE LRAISINQGV
ARVDFSARFA EASDRNAAVR TLVESLTTLP RVSGVQILVE GRSLAEWWGE PYGRVYPKPL
INPEG
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