Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1805 |
Symbol | |
ID | 5539283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2316660 |
End bp | 2317208 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893944 |
Product | hypothetical protein |
Protein accession | YP_001431915 |
Protein GI | 156741786 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATGT CAAAACCGAT CACCGATTTG AAGTTCAACG TCGCCCAACT GTTGCGCGAG TACGTCGGCG CGTCACGCAG GTACGACTTT GCTGAGCCGG TGCTGCGCCT CGACGATACG CTCGAAATGC GCGGCATGGT CGGTGAGGTG CGGTTTACCC GCACCGCCAG CGGGGTATTG GTCGATGTGC ATGCCCGCGG AACGGTGGAG ATGGAGTGTG TCCGCTGCCT CAATCCGGCT GTGCAGCCTA TCGAGGTGCG CTTCCGTGAT GAGTTCCATT CGCGGATCGA TGTGACGACC GGAACGCCGC TGCCGCAACC CGACGAGGAG GACCCCTTCT ATCTCGATGA GTTGCATATG GCGGACGTCG GCGAGATGCT GCGCGAGTAT GTGCTGCTTG AACTGCCTAT GCAGCCGCTC TGTCGTCCCG ACTGCCGTGG TCTTTGCCCG GAGTGCGGCG CCGATCTGAA TGTCGAGCAG TGTTCGTGCG GCAGTTCTGG CGGCGATGAA CGGTTCGCTG CGCTGCGCGC GCTTCTGAAG CCAGAATAG
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Protein sequence | MHMSKPITDL KFNVAQLLRE YVGASRRYDF AEPVLRLDDT LEMRGMVGEV RFTRTASGVL VDVHARGTVE MECVRCLNPA VQPIEVRFRD EFHSRIDVTT GTPLPQPDEE DPFYLDELHM ADVGEMLREY VLLELPMQPL CRPDCRGLCP ECGADLNVEQ CSCGSSGGDE RFAALRALLK PE
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